CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037346.1-P	Field mustard	mitochondrion, plastid	98.54	98.34
CDY07210	Canola	mitochondrion	97.08	97.9
AT4G00550.1	Thale cress	cytosol	88.75	90.06
VIT_11s0016g00030.t01	Wine grape	cytosol	45.21	72.33
KRH40509	Soybean	cytosol	68.54	71.06
KRH00685	Soybean	cytosol	68.33	70.84
KRH15982	Soybean	cytosol	16.88	69.23
VIT_15s0046g03730.t01	Wine grape	cytosol	67.08	69.1
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.17	68.97
GSMUA_AchrUn_...	Banana	cytosol	65.21	66.31
Os03t0268300-01	Rice	golgi	63.96	66.31
PGSC0003DMT400000445	Potato	endoplasmic reticulum	62.92	65.37
PGSC0003DMT400026609	Potato	cytosol	62.5	65.08
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	64.38	65.05
Solyc10g017580.2.1	Tomato	cytosol	62.29	64.86
EER92641	Sorghum	golgi	63.54	64.21
Os03t0214400-01	Rice	plasma membrane	63.54	64.08
GSMUA_Achr10P...	Banana	cytosol	62.29	63.62
EER92494	Sorghum	golgi	61.46	63.58
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	61.04	62.47
Solyc01g094170.2.1	Tomato	cytosol	54.79	62.47
Zm00001d028571_P001	Maize	golgi	61.67	62.32
TraesCS4D01G246000.1	Wheat	mitochondrion	61.46	61.97
TraesCS4B01G246700.1	Wheat	mitochondrion	61.46	61.97
HORVU4Hr1G067920.1	Barley	mitochondrion	61.25	61.76
TraesCS4A01G093900.1	Wheat	mitochondrion	63.75	61.32
TraesCS4B01G210400.1	Wheat	mitochondrion	63.54	61.12
TraesCS4D01G211200.1	Wheat	mitochondrion	63.54	61.12
HORVU4Hr1G060440.2	Barley	mitochondrion	63.54	61.0
TraesCS4A01G058200.1	Wheat	cytosol	61.67	57.93
GSMUA_Achr8P02450_001	Banana	cytosol	18.12	53.7
VIT_07s0141g01080.t01	Wine grape	cytosol	12.29	52.68
CDY08505	Canola	cytosol, plastid	52.29	31.03
CDY01047	Canola	cytosol, plastid	52.08	31.02

Protein Annotations

EnsemblPlants:CDY51152	EnsemblPlantsGene:GSBRNA2T00098338001	Gene3D:3.40.50.2000	ncoils:Coil	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460
PFAM:PF13692	ProteinID:CDY51152	ProteinID:CDY51152.1	SEG:seg	SUPFAM:SSF53756	UniParc:UPI0004EDDC0C
UniProt:A0A078IMJ9	MapMan:5.3.3	:	:	:	:

Description

BnaA09g51870DBnaA09g51870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMJ9]

Coordinates

chrLK032970:+:46500..49512

Molecular Weight (calculated)

54796.7 Da

IEP (calculated)

9.109

GRAVY (calculated)

-0.409

Length

480 amino acids

Sequence
(BLAST)

001: MMMKQQQQQQ QQKQHIAIFT TASLPWLTGT AVNPLFRAAY LAKDGQRRVT LVIPWLTLNH QLLVYPNNIT FASPSHQEAY VRRWLEDRVS FPLSFEIRFY
101: PGKFATDKRS ILPVGDISDT IPDEEADIAV LEEPEHLTWF HHGRKWKTKF NYVIGIVHTN YLEYVKREKQ GRLKAFLLKY LNSWVVGIYC HKVIRLSDAT
201: QEYPKSIVCN VHGVNPKFLE IGLKKLEQQK LQEQPFTKGA YYIGKMVWSK GYKELLKLLK KHQKELAGLE VDLYGSGEDS EEIKQAARKL DLTVNVYPGR
301: DHADPLFHNY KVFLNPSTTD VVCTTTAEAL AMGKIVVCAD HTSNEFFKQF PNCRVYDDGK GFVRATLKAL GEQPSQLTEQ QRHELSWEAA TQRFIRASDL
401: NRLARVDSNL SKKSLFASSS ISVGKNLEDM SAYIHFLASG FETSRTAFGA IPGSLQPDEE LCKDLGLTLK TPSRNSLKED

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.