CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51152	Canola	mitochondrion, plastid	97.9	97.08
AT4G00550.1	Thale cress	cytosol	90.13	90.7
VIT_11s0016g00030.t01	Wine grape	cytosol	45.59	72.33
KRH40509	Soybean	cytosol	69.33	71.27
KRH00685	Soybean	cytosol	69.12	71.06
KRH15982	Soybean	cytosol	17.23	70.09
VIT_15s0046g03730.t01	Wine grape	cytosol	67.65	69.1
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.2	68.97
Os03t0268300-01	Rice	golgi	63.66	65.44
PGSC0003DMT400000445	Potato	endoplasmic reticulum	63.45	65.37
GSMUA_AchrUn_...	Banana	cytosol	64.71	65.25
PGSC0003DMT400026609	Potato	cytosol	63.03	65.08
Solyc10g017580.2.1	Tomato	cytosol	62.82	64.86
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	64.5	64.63
EER92641	Sorghum	golgi	63.66	63.79
Os03t0214400-01	Rice	plasma membrane	63.66	63.66
GSMUA_Achr10P...	Banana	cytosol	62.18	62.98
EER92494	Sorghum	golgi	60.92	62.5
Solyc01g094170.2.1	Tomato	cytosol	55.25	62.47
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.92	61.83
TraesCS4D01G246000.1	Wheat	mitochondrion	61.55	61.55
TraesCS4B01G246700.1	Wheat	mitochondrion	61.55	61.55
HORVU4Hr1G067920.1	Barley	mitochondrion	61.34	61.34
Zm00001d028571_P001	Maize	golgi	61.13	61.26
TraesCS4A01G093900.1	Wheat	mitochondrion	63.45	60.52
TraesCS4B01G210400.1	Wheat	mitochondrion	63.24	60.32
TraesCS4D01G211200.1	Wheat	mitochondrion	63.24	60.32
HORVU4Hr1G060440.2	Barley	mitochondrion	63.24	60.2
TraesCS4A01G058200.1	Wheat	cytosol	61.76	57.53
GSMUA_Achr8P02450_001	Banana	cytosol	18.28	53.7
VIT_07s0141g01080.t01	Wine grape	cytosol	12.39	52.68
CDY08505	Canola	cytosol, plastid	52.31	30.78
CDY01047	Canola	cytosol, plastid	52.1	30.77

Protein Annotations

EnsemblPlants:CDY07210	EnsemblPlantsGene:GSBRNA2T00123570001	Gene3D:3.40.50.2000	GO:A0A078EYN2	InterPro:Glyco_trans_1	ncoils:Coil
PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	PFAM:PF00534	ProteinID:CDY07210	ProteinID:CDY07210.1	SEG:seg
SUPFAM:SSF53756	TMHMM:TMhelix	UniParc:UPI0004EE2159	MapMan:5.3.3	:	:

Description

BnaCnng02250D

Coordinates

chrLK031975:+:838098..840745

Molecular Weight (calculated)

54121.7 Da

IEP (calculated)

8.833

GRAVY (calculated)

-0.398

Length

476 amino acids

Sequence
(BLAST)

001: MKQQQQQQKQ HIAIFTTASL PWLTGTAVNP LFRAAYLAKD GQRRVTLVIP WLTLNHQLLV YPNNITFASP SHQEAYVRRW LEDRVSFPLG FELRFYPGKF
101: ATDKRSILPV GDISDAIPDE EADIAVLEEP EHLTWFHHGK KWKTKFNYVI GIVHTNYLEY VKREKQGRLK AFLLKYLNSW VVGIYCHKVI RLSDATQEYP
201: KSIVCNVHGV NPKFLEIGLK KLEQQKLQEQ PFTKGAYYIG KMVWSKGYKE LLKLLKKHQK ELAGLEVDLY GSGEDSEEIK EAARKLDLTV NVYPGRDHAD
301: PLFHNYKVFL NPSTTDVVCT TTAEALAMGK IVVCADHTSN EFFKQFPNCR VYDDGKGFVR ATLKALGEQP SQLTEQQRHE LSWEAATQRF ISASDLNRLA
401: RADSNLSKRS LFASSSISVG KNLEDMSAYI HFLASGFETS RTAFGAIPGS LQPDEELCKD LGLTLKTPSR NSLKED

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.