Factsheet for GSMUA_AchrUn_randomP09630_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g00030.t01	Wine grape	cytosol	47.25	74.33
EER92641	Sorghum	golgi	70.97	70.53
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	70.97	70.53
KRH00685	Soybean	cytosol	69.07	70.41
VIT_15s0046g03730.t01	Wine grape	cytosol	69.28	70.17
KRH40509	Soybean	cytosol	68.64	69.98
Os03t0214400-01	Rice	plasma membrane	70.34	69.75
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	68.64	69.08
GSMUA_Achr10P...	Banana	cytosol	68.64	68.94
TraesCS4B01G246700.1	Wheat	mitochondrion	68.43	67.86
TraesCS4D01G246000.1	Wheat	mitochondrion	68.22	67.65
HORVU4Hr1G067920.1	Barley	mitochondrion	68.01	67.44
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.03	65.52
CDY51152	Canola	mitochondrion, plastid	66.31	65.21
CDY07210	Canola	mitochondrion	65.25	64.71
AT4G00550.1	Thale cress	cytosol	64.62	64.48
Bra037346.1-P	Field mustard	mitochondrion, plastid	65.47	64.24
KRH15982	Soybean	cytosol	15.89	64.1
TraesCS4A01G058200.1	Wheat	cytosol	69.07	63.8
GSMUA_Achr8P02450_001	Banana	cytosol	21.82	63.58
PGSC0003DMT400000445	Potato	endoplasmic reticulum	61.44	62.77
PGSC0003DMT400026609	Potato	cytosol	60.59	62.04
Solyc10g017580.2.1	Tomato	cytosol	59.96	61.39
Solyc01g094170.2.1	Tomato	cytosol	53.81	60.33
VIT_07s0141g01080.t01	Wine grape	cytosol	12.5	52.68
GSMUA_Achr10P...	Banana	cytosol	52.54	31.35
GSMUA_Achr11P...	Banana	cytosol	53.6	31.04
GSMUA_Achr10P...	Banana	cytosol	6.36	15.87

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP09630_001	EnsemblPlants:GSMUA_AchrUn_randomT09630_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG09630_001	Gene3D:3.40.50.2000	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460
PFAM:PF13692	SEG:seg	SUPFAM:SSF53756	UniParc:UPI000294E4E8	UniProt:M0U7S3	MapMan:5.3.3

Description

Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09630_001]

Coordinates

chrchrUn_random:+:45204389..45208679

Molecular Weight (calculated)

53883.5 Da

IEP (calculated)

9.235

GRAVY (calculated)

-0.386

Length

472 amino acids

Sequence
(BLAST)

001: MSRKQHIAIF TTASLPWMTG TAVNPLFRAA YLAKNGDREV TLVIPWLSIK DQELVYPNNI TFNSASEHDS YVRHWLEARI DFQSCFNIKF YPSKFSRDKR
101: SILPVGDITE TIPDEEADIA ILEEPEHLNW YHHGRRWKTK FRQVIGIIHT NYLEYVKREK NGPLLSLVVK YANTWVTRIY CHKIIRLSAA TQDFPRSVIC
201: NVHGVNPKFL EIGKAKLAHL QRGELAFTKG AYYIGKMVWS KGYKELLKLL SKYQQKLTGV QVDLYGSGED SDQVQQAAEM LSLAVRVYPG RDHADPQFHD
301: YKVFLNPSTT DVVCTTTAEA LAMGKIVICA NHPSNDFFKQ FPNCYIYNDD DDFVKLTIKA LAEEPSPLPD HLRHQLSWEA ATERFLTAAE LDPVVPEKSP
401: ASSSKPFFSS SFKSRKSKRN LEEASVYLHQ KISGIEVARR AFGAIPKSLK PDDQLCKELG LVIAEKKPSR RR

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.