Factsheet for HORVU4Hr1G067920.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G246700.1	Wheat	mitochondrion	97.9	97.9
TraesCS4D01G246000.1	Wheat	mitochondrion	97.48	97.48
TraesCS4A01G058200.1	Wheat	cytosol	97.48	90.8
EER92641	Sorghum	golgi	84.45	84.63
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	83.82	84.0
Os03t0214400-01	Rice	plasma membrane	83.4	83.4
GSMUA_AchrUn_...	Banana	cytosol	67.44	68.01
VIT_11s0016g00030.t01	Wine grape	cytosol	42.65	67.67
KRH00685	Soybean	cytosol	62.4	64.15
KRH40509	Soybean	cytosol	62.4	64.15
VIT_15s0046g03730.t01	Wine grape	cytosol	61.76	63.09
KRH15982	Soybean	cytosol	15.13	61.54
CDY07210	Canola	mitochondrion	61.34	61.34
AT4G00550.1	Thale cress	cytosol	60.92	61.31
CDY51152	Canola	mitochondrion, plastid	61.76	61.25
Bra037346.1-P	Field mustard	mitochondrion, plastid	61.34	60.71
PGSC0003DMT400000445	Potato	endoplasmic reticulum	58.19	59.96
HORVU4Hr1G060440.2	Barley	mitochondrion	62.82	59.8
PGSC0003DMT400026609	Potato	cytosol	56.93	58.79
Solyc01g094170.2.1	Tomato	cytosol	51.68	58.43
Solyc10g017580.2.1	Tomato	cytosol	56.09	57.92
VIT_07s0141g01080.t01	Wine grape	cytosol	10.5	44.64
HORVU4Hr1G020770.3	Barley	nucleus	50.63	31.71
HORVU2Hr1G073850.5	Barley	cytosol	51.68	30.33

Protein Annotations

EnsemblPlants:HORVU4Hr1G067920.1	EnsemblPlantsGene:HORVU4Hr1G067920	Gene3D:3.40.50.2000	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	PFAM:PF13692
SUPFAM:SSF53756	UniParc:UPI000296E052	UniProt:M0XEW6	MapMan:5.3.3	:	:

Description

No Description!

Coordinates

chrchr4H:-:563722511..563726297

Molecular Weight (calculated)

54463.3 Da

IEP (calculated)

8.705

GRAVY (calculated)

-0.386

Length

476 amino acids

Sequence
(BLAST)

001: MSARRHFAVF TTASLPWMTG TSINPLFRAA YLAKDGSRDV TLLIPWLSLR DQELVYPNKV VFGSPLEQEG YVRRWIEERV DFRPSFSIKF YPAKFSKEMR
101: SILPVGDITE CIPDEAADIA VLEEPEHLNW YHHGRRWKNK FRRVIGVIHT NYLAYVRREK NGQVIACCLR YANTWVTRIY CHKIIRLSGA TQDLPKSVVC
201: NVHGVNPKFL EVGRLKLKQL QNGEAAFTKG AYYIGKMVWS KGYRELLDLL SKYQSRLGDL EVDLYGSGED SDEIRESAER SSLAVNVHPG RDHADPLFHD
301: YKVFINPSTT DVVCTTSAEA LAMGKIVICA NHPSNEFFKQ FPNCRIYNND EEFVQHTLNA LAEQPTPLTD MQMYDLSWEA ATDRFMEAAE INLPTAEPRI
401: QQASKTYFPT FLRTRKLKQS LEDASVYLHQ ALSGLEVTRC AFGAVPKTLQ PDEQLRKDLG LASPPKRKKL KQKLMT

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.