Factsheet for HORVU4Hr1G060440.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 5
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G210400.1	Wheat	mitochondrion	95.4	95.59
TraesCS4D01G211200.1	Wheat	mitochondrion	95.2	95.39
TraesCS4A01G093900.1	Wheat	mitochondrion	93.8	93.99
Os03t0268300-01	Rice	golgi	84.6	91.36
EER92494	Sorghum	golgi	80.0	86.21
Zm00001d028571_P001	Maize	golgi	80.2	84.42
VIT_11s0016g00030.t01	Wine grape	cytosol	42.6	71.0
GSMUA_Achr10P...	Banana	cytosol	65.2	69.36
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.8	66.95
VIT_15s0046g03730.t01	Wine grape	cytosol	61.6	66.09
GSMUA_Achr8P02450_001	Banana	cytosol	21.4	66.05
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	3.8	65.52
KRH40509	Soybean	cytosol	59.6	64.36
KRH00685	Soybean	cytosol	59.2	63.93
CDY51152	Canola	mitochondrion, plastid	61.0	63.54
Bra037346.1-P	Field mustard	mitochondrion, plastid	61.0	63.41
KRH15982	Soybean	cytosol	14.8	63.25
CDY07210	Canola	mitochondrion	60.2	63.24
AT4G00550.1	Thale cress	cytosol	59.8	63.21
HORVU4Hr1G067920.1	Barley	mitochondrion	59.8	62.82
PGSC0003DMT400000445	Potato	endoplasmic reticulum	55.8	60.39
PGSC0003DMT400026609	Potato	cytosol	55.0	59.65
Solyc10g017580.2.1	Tomato	cytosol	54.6	59.22
Solyc01g094170.2.1	Tomato	cytosol	49.6	58.91
VIT_07s0141g01080.t01	Wine grape	cytosol	10.8	48.21
HORVU4Hr1G020770.3	Barley	nucleus	50.4	33.16
HORVU2Hr1G073850.5	Barley	cytosol	51.6	31.81

Protein Annotations

EnsemblPlants:HORVU4Hr1G060440.2	EnsemblPlantsGene:HORVU4Hr1G060440	Gene3D:3.40.50.2000	InterPro:Glyco_trans_1	ncoils:Coil	PANTHER:PTHR12526
PANTHER:PTHR12526:SF427	PFAM:PF00534	SEG:seg	SUPFAM:SSF53756	UniParc:UPI0002951654	UniProt:M0VVZ6
MapMan:5.3.3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:508033633..508036387

Molecular Weight (calculated)

57313.9 Da

IEP (calculated)

8.587

GRAVY (calculated)

-0.381

Length

500 amino acids

Sequence
(BLAST)

001: MRYSSMLLHH LKASGHIPWK LHAVAVCGGV VCEAMAMARR QHITIFTTAS LPWMTGTAVN PLFRAAYLAK ARDWEVTLVV PWLSKGDQTL VYPNKMKFSG
101: PAEQEGYVRR WLEERTGPLP RFNINFYPGK FSTEKRSILP VGDITETISD ENADIAVLEE PEHLTWYHHG RRWKNKFRKV IGVVHTNYLE YVKRERNGYI
201: HAFLLKHINS WVTDIYCHKV IRLSGATQEV PRSVICNVHG VNPKFIEIGK LKHQQISQRE QSFFKGAYYI GKMVWSKGYT ELLHLLQKHQ KELSGLKMEL
301: YGSGEDSDEV KASAEKLNLD VRVYPGRDHA DSIFHDYKVF INPSTTDVVC TTTAEALAMG KIVICANHPS NEFFKRFPNC HMYSMEKEFV RLTMKALTEE
401: PIPLTEELRH ELSWEAATER FVRVADIAPA TPAKQHPSSS QRFMYINPDE LKKNMEEASA FFHNTISGFE AARCVFGAIP NSLQPDEQQC KELGWRPQGL

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.