Factsheet for Zm00001d028571_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92494	Sorghum	golgi	92.0	94.18
Os03t0268300-01	Rice	golgi	86.11	88.34
TraesCS4B01G210400.1	Wheat	mitochondrion	84.84	80.76
TraesCS4D01G211200.1	Wheat	mitochondrion	84.63	80.56
TraesCS4A01G093900.1	Wheat	mitochondrion	84.42	80.36
HORVU4Hr1G060440.2	Barley	mitochondrion	84.42	80.2
VIT_11s0016g00030.t01	Wine grape	cytosol	43.58	69.0
GSMUA_Achr8P02460_001	Banana	cytosol, nucleus	4.21	68.97
GSMUA_Achr10P...	Banana	cytosol	67.37	68.09
GSMUA_Achr9P03500_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	65.26	66.1
VIT_15s0046g03730.t01	Wine grape	cytosol	63.58	64.81
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	64.63	64.63
KRH40509	Soybean	cytosol	62.32	63.93
KRH00685	Soybean	cytosol	62.11	63.71
GSMUA_Achr8P02450_001	Banana	cytosol	21.68	63.58
KRH15982	Soybean	cytosol	15.37	62.39
AT4G00550.1	Thale cress	cytosol	61.68	61.95
CDY51152	Canola	mitochondrion, plastid	62.32	61.67
Bra037346.1-P	Field mustard	mitochondrion, plastid	62.11	61.33
CDY07210	Canola	mitochondrion	61.26	61.13
PGSC0003DMT400000445	Potato	endoplasmic reticulum	57.47	59.09
PGSC0003DMT400026609	Potato	cytosol	56.63	58.35
Solyc10g017580.2.1	Tomato	cytosol	56.0	57.7
Solyc01g094170.2.1	Tomato	cytosol	50.74	57.24
Zm00001d053174_P001	Maize	cytosol	14.11	49.63
VIT_07s0141g01080.t01	Wine grape	cytosol	10.95	46.43
Zm00001d016731_P001	Maize	nucleus	54.53	32.7
Zm00001d003750_P001	Maize	cytosol	53.68	32.57
Zm00001d053149_P002	Maize	plastid	52.21	32.55
Zm00001d025459_P001	Maize	plastid	20.84	30.37
Zm00001d039953_P001	Maize	cytosol	11.79	28.43
Zm00001d005882_P004	Maize	cytosol	18.11	25.15
Zm00001d018594_P001	Maize	plastid	9.05	25.0
Zm00001d043881_P001	Maize	plastid	8.21	20.97

Protein Annotations

EnsemblPlants:Zm00001d028571_P001	EnsemblPlants:Zm00001d028571_T001	EnsemblPlantsGene:Zm00001d028571	EntrezGene:100277520	Gene3D:3.40.50.2000	InterPro:Glyco_trans_1
PANTHER:PTHR12526	PANTHER:PTHR12526:SF427	PFAM:PF00534	PFscan:PS51257	ProteinID:ONL96448.1	ProteinID:ONL96451.1
SUPFAM:SSF53756	UniParc:UPI0008430FE0	UniProt:A0A1D6JXP7	MapMan:5.3.3	:	:

Description

Digalactosyldiacylglycerol synthase 2 chloroplastic

Coordinates

chr1:-:39418149..39423479

Molecular Weight (calculated)

54294.2 Da

IEP (calculated)

7.465

GRAVY (calculated)

-0.311

Length

475 amino acids

Sequence
(BLAST)

001: MARKHQHVAI FTTACLPWMT GTAVNPLFRA AYLAKAGDWE VTLVVPWLSK GDQELVYPNK MRFSLPAEQE NYVRRWLEER TGLLPKFDIK FYPGKFSTEK
101: RSILPVGDIS QTISDDKADI AVLEEPEHLT WYHHGRRWKS KFQKVIGVVH TNYLEYVKRE KNGYISAFIL KHINSWVTDI YCHKVLPSFQ AIGKMVIRLS
201: AATQDVPRSV ICNVHGVNPK FIEIGKLKHQ QLCQREQAFF KGAYYIGKMV WSKGYTELLQ LLHKHQMELS GLKMELYGSG EDADEVKASA ERLSLDIRVY
301: PGRDHGDSIF HDYKVFINPS TTDVVCTTTA EALAMGKIVI CANHPSNVFF KRFPNCHMYN TDEEFVRLTM KALAEEPIPL SDDLRHELSW EAATERFIRV
401: ADIAPTVPVG QPPPSSQHFM RISPDELQKN MEEASAFFHN TISGFEAVRC VFGAIPNTLQ PDEQQCKELG WNLQG

Best Arabidopsis Sequence Match ( AT3G11670.1 )
(BLAST)

001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW

Arabidopsis Description

DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.