Factsheet for Zm00001d028211_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, plastid

Predictor Summary:

mitochondrion 2
nucleus 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92641	Sorghum	golgi	94.95	94.95
TraesCS4B01G246700.1	Wheat	mitochondrion	84.21	84.03
HORVU4Hr1G067920.1	Barley	mitochondrion	84.0	83.82
TraesCS4D01G246000.1	Wheat	mitochondrion	83.79	83.61
Os03t0214400-01	Rice	plasma membrane	83.37	83.19
TraesCS4A01G058200.1	Wheat	cytosol	84.84	78.86
VIT_11s0016g00030.t01	Wine grape	cytosol	45.47	72.0
GSMUA_AchrUn_...	Banana	cytosol	70.53	70.97
VIT_15s0046g03730.t01	Wine grape	cytosol	65.26	66.52
KRH00685	Soybean	cytosol	63.79	65.44
KRH40509	Soybean	cytosol	63.79	65.44
Zm00001d028571_P001	Maize	golgi	64.63	64.63
CDY07210	Canola	mitochondrion	64.63	64.5
CDY51152	Canola	mitochondrion, plastid	65.05	64.38
AT4G00550.1	Thale cress	cytosol	63.58	63.85
Bra037346.1-P	Field mustard	mitochondrion, plastid	64.21	63.41
KRH15982	Soybean	cytosol	15.37	62.39
PGSC0003DMT400000445	Potato	endoplasmic reticulum	59.79	61.47
PGSC0003DMT400026609	Potato	cytosol	59.58	61.39
Solyc10g017580.2.1	Tomato	cytosol	59.16	60.95
Solyc01g094170.2.1	Tomato	cytosol	52.84	59.62
Zm00001d053174_P001	Maize	cytosol	14.95	52.59
VIT_07s0141g01080.t01	Wine grape	cytosol	11.58	49.11
Zm00001d053149_P002	Maize	plastid	54.11	33.73
Zm00001d016731_P001	Maize	nucleus	55.16	33.08
Zm00001d003750_P001	Maize	cytosol	53.47	32.44
Zm00001d025459_P001	Maize	plastid	21.47	31.29
Zm00001d018594_P001	Maize	plastid	10.11	27.91
Zm00001d039953_P001	Maize	cytosol	11.16	26.9
Zm00001d005882_P004	Maize	cytosol	19.37	26.9
Zm00001d043881_P001	Maize	plastid	8.63	22.04

Protein Annotations

EMBL:BT062753	EnsemblPlants:Zm00001d028211_P002	EnsemblPlants:Zm00001d028211_T002	EnsemblPlantsGene:Zm00001d028211	EntrezGene:100382823	Gene3D:3.40.50.2000
PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	PFAM:PF13692	ProteinID:ONL95065.1	ProteinID:ONL95066.1	ProteinID:ONL95067.1
SUPFAM:SSF53756	UniParc:UPI0001949078	UniProt:C0P384	MapMan:5.3.3	:	:

Description

Digalactosyldiacylglycerol synthase 2 chloroplastic

Coordinates

chr1:-:26525210..26529825

Molecular Weight (calculated)

54378.2 Da

IEP (calculated)

8.570

GRAVY (calculated)

-0.368

Length

475 amino acids

Sequence
(BLAST)

001: MSMKRHFAIF TTASLPWMTG TSINPLFRAA YLAKDGDKDV TLVIPWLCLR DQELVYPNNI VFDSPSEQES YVRHWIEERI DFRPSFSIKF YPGKFSKEMR
101: SILPVGDITE CIPDEVADVA VLEEPEHLNW YHHGRRWKNK FRRVIGIVHT NYLAYVRREK NGQVIACFLK YANTWVTRIY CHKIIRLSGA TQNLPRSVIC
201: NVHGVNPKFL EVGKLKLRQL QNGEKAFTKG AYYIGKMVWS KGYRELLDLL SKYQSKLVGL EVDLYGSGED SDEVCESAKR LSLSVNVHPG RDHADPLFHE
301: YKVFINPSTT DVVCTTTAEA LAMGKIVICA NHPSNEFFKQ FPNCRVYDNE DEFVQLTLNA LSEQPAPLTD TQRYELSWDA ATERFIEASD INPHVPESRA
401: HQNSRALLPA FLRTRKLKQN LEDASVYLHQ ALSGLEVTRC AFGAVPKTLQ PDEHLCKDLG LAPPAKKRRL KIKKT

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.