CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	94.95	94.95
TraesCS4B01G246700.1	Wheat	mitochondrion	84.84	84.66
HORVU4Hr1G067920.1	Barley	mitochondrion	84.63	84.45
TraesCS4D01G246000.1	Wheat	mitochondrion	84.42	84.24
Os03t0214400-01	Rice	plasma membrane	83.58	83.4
TraesCS4A01G058200.1	Wheat	cytosol	85.47	79.45
VIT_11s0016g00030.t01	Wine grape	cytosol	45.05	71.33
GSMUA_AchrUn_...	Banana	cytosol	70.53	70.97
VIT_15s0046g03730.t01	Wine grape	cytosol	64.84	66.09
EER92494	Sorghum	golgi	64.42	65.95
KRH00685	Soybean	cytosol	64.21	65.87
KRH40509	Soybean	cytosol	64.0	65.66
KRH15982	Soybean	cytosol	15.79	64.1
CDY07210	Canola	mitochondrion	63.79	63.66
AT4G00550.1	Thale cress	cytosol	63.37	63.64
CDY51152	Canola	mitochondrion, plastid	64.21	63.54
Bra037346.1-P	Field mustard	mitochondrion, plastid	63.37	62.58
PGSC0003DMT400000445	Potato	endoplasmic reticulum	59.79	61.47
PGSC0003DMT400026609	Potato	cytosol	58.74	60.52
Solyc01g094170.2.1	Tomato	cytosol	53.47	60.33
Solyc10g017580.2.1	Tomato	cytosol	58.11	59.87
VIT_07s0141g01080.t01	Wine grape	cytosol	11.58	49.11
KXG27790	Sorghum	nucleus	53.68	34.55
EES10780	Sorghum	cytosol	53.89	32.49
EES05202	Sorghum	plastid	53.89	32.32

Protein Annotations

EnsemblPlants:EER92641	EnsemblPlantsGene:SORBI_3001G456300	Gene3D:3.40.50.2000	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460	PFAM:PF13692
ProteinID:EER92641	ProteinID:EER92641.2	SUPFAM:SSF53756	unigene:Sbi.20963	UniParc:UPI0001C80B2E	UniProt:C5WSS6
MapMan:5.3.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:73263114..73267752

Molecular Weight (calculated)

54408.2 Da

IEP (calculated)

8.073

GRAVY (calculated)

-0.328

Length

475 amino acids

Sequence
(BLAST)

001: MSTRRHFAIF TTASLPWMTG TAINPLFRAA YLAKDGDKDV TLVIPWLCLR DQELVYPNNI VFDSPLEHES YVHHWIEERI DFRPSFSIKF YPGKFSKEMR
101: SILPVGDITE CIPDEVADIA VLEEPEHLNW YHHGRRWKNK FRRVIGIVHT NYLAYVRREK NGQVIACFLK YANTWVTRIY CHKIIRLSGA TQDLPRSVIC
201: NVHGVNPKFL EVGKLKLRQL QNGEKAFTKG AYYIGKMVWS KGYRELLDLL SKYQSKLVGL EVDLYGSGED SDEVCESAKR LSLSINVHPG RDHADPLFHE
301: YKVFINPSTT DVVCTTTAEA LAMGKIVICA NHSSNEFFKQ FPNCRIYDNE DEFVQLTLNA LSEQPAPLTD AQRYELSWEA ATQRFIEAAD INPHVPESRT
401: HQSSRALLPA FLRTRKLKQN LEDASVYLHQ ALSGLEVTRC AFGAVPKTLQ PDEDLCKDLG LAPPVNRKRL KFKMT

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.