Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003750_P001 | Maize | cytosol | 89.85 | 90.42 |
| Os04t0416900-01 | Rice | cytosol, mitochondrion | 8.5 | 87.01 |
| Zm00001d039953_P001 | Maize | cytosol | 20.69 | 82.74 |
| TraesCS2A01G297800.1 | Wheat | cytosol | 75.63 | 78.11 |
| EES05202 | Sorghum | plastid | 71.45 | 71.09 |
| TraesCS2B01G314000.1 | Wheat | mitochondrion | 75.76 | 68.46 |
| TraesCS2D01G295800.2 | Wheat | cytosol | 76.14 | 68.1 |
| HORVU2Hr1G073850.5 | Barley | cytosol | 69.54 | 67.57 |
| KXG27790 | Sorghum | nucleus | 59.77 | 63.82 |
| EER92494 | Sorghum | golgi | 32.23 | 54.74 |
| EER92641 | Sorghum | golgi | 32.49 | 53.89 |
| GSMUA_Achr10P... | Banana | cytosol | 5.71 | 23.81 |
Protein Annotations
| Gene3D:3.40.50.2000 | MapMan:5.3.3 | EntrezGene:8077578 | UniProt:C5YGA8 | EnsemblPlants:EES10780 | ProteinID:EES10780 |
| ProteinID:EES10780.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009536 |
| GO:GO:0009707 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019375 | GO:GO:0035250 |
| PFAM:PF13692 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF471 | EnsemblPlantsGene:SORBI_3006G075100 | SUPFAM:SSF53756 | unigene:Sbi.6391 |
| UniParc:UPI0001A86F7A | RefSeq:XP_002446452.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:43802746..43809453
Molecular Weight (calculated)
88909.9 Da
IEP (calculated)
8.824
GRAVY (calculated)
-0.462
Length
788 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNKEETPP ADGGGAFAFI SKGWREVRDS ASADLRLMRA RADSVRARAD RELEHLLASA SALAAGPAPP LLPPVATGAP IAEVEFVRKR IQPKIQELRS
101: RALDARWPTG AAGAGAGARA SSLRIDLSAI TAIRNAVVAE GEGGDRWRRI ARRKGDQDED EEEGRKEWEV VRMIQRGLKE FERRSLSSDM FAGFRARGEF
201: VEKFKLSTKS LNKDYQESKE VPPLHLTEIL AYLVRQSGPF LDQLCIRRDL CDKLVEMLYS KRNGRLMYHS LSQDRPLAEN MTDELDLRIA RVLESTGYHT
301: DEGFWNDPAK YKISDNRRHV AIVTTASLPW MTGTAINPLF RAAYLARSAK QKVTLVVPWL SKSDQELVYP NNITFSSPEE QETYIRNWLQ ERIGFEAIFK
401: ISFYPGKFSK ERRSIIPAGD TSQFISSKEA DIAILEEPEH LNWYHHGKRW TDKFNHVIGV VHTNYLEYIK REKNGAIQSF LVKHINNWVT RAYCHKVLRL
501: SAATQDLPRS VVCNVHGVNP KFLNVGAKIA ADRECGQKVF SKGAYFLGKM VWAKGYRELI DLLSKHKNDL EGFMIDVYGN GEDSEAVQNA ARKFDLSINF
601: FKGKDHADDS LHGYKVFVNP SVSDVLCTAT AEALAMGKFV VCADHPSNDF FKSFPNCLTY RTSEEFVARV KEAMTTEPQP LTPEQRYNLS WEAATERFME
701: YSELDKVLNR NGHPGRNGKI NKARKIPLLP KLSDVVDGGL AFAHHCLTGN EILRLATGAI PGTRDYDKQQ CMDLNLLPPQ VQHPVYGW
101: RALDARWPTG AAGAGAGARA SSLRIDLSAI TAIRNAVVAE GEGGDRWRRI ARRKGDQDED EEEGRKEWEV VRMIQRGLKE FERRSLSSDM FAGFRARGEF
201: VEKFKLSTKS LNKDYQESKE VPPLHLTEIL AYLVRQSGPF LDQLCIRRDL CDKLVEMLYS KRNGRLMYHS LSQDRPLAEN MTDELDLRIA RVLESTGYHT
301: DEGFWNDPAK YKISDNRRHV AIVTTASLPW MTGTAINPLF RAAYLARSAK QKVTLVVPWL SKSDQELVYP NNITFSSPEE QETYIRNWLQ ERIGFEAIFK
401: ISFYPGKFSK ERRSIIPAGD TSQFISSKEA DIAILEEPEH LNWYHHGKRW TDKFNHVIGV VHTNYLEYIK REKNGAIQSF LVKHINNWVT RAYCHKVLRL
501: SAATQDLPRS VVCNVHGVNP KFLNVGAKIA ADRECGQKVF SKGAYFLGKM VWAKGYRELI DLLSKHKNDL EGFMIDVYGN GEDSEAVQNA ARKFDLSINF
601: FKGKDHADDS LHGYKVFVNP SVSDVLCTAT AEALAMGKFV VCADHPSNDF FKSFPNCLTY RTSEEFVARV KEAMTTEPQP LTPEQRYNLS WEAATERFME
701: YSELDKVLNR NGHPGRNGKI NKARKIPLLP KLSDVVDGGL AFAHHCLTGN EILRLATGAI PGTRDYDKQQ CMDLNLLPPQ VQHPVYGW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.