Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G295800.2 | Wheat | cytosol | 97.25 | 84.22 |
| TraesCS2B01G314000.1 | Wheat | mitochondrion | 95.54 | 83.6 |
| HORVU2Hr1G073850.5 | Barley | cytosol | 84.27 | 79.28 |
| EES10780 | Sorghum | cytosol | 78.11 | 75.63 |
| Zm00001d003750_P001 | Maize | cytosol | 77.46 | 75.48 |
| Os04t0416900-01 | Rice | cytosol, mitochondrion | 7.6 | 75.32 |
| Zm00001d039953_P001 | Maize | cytosol | 19.14 | 74.11 |
| TraesCS4A01G200600.1 | Wheat | nucleus | 58.85 | 61.68 |
| TraesCS4A01G093900.1 | Wheat | mitochondrion | 34.73 | 53.11 |
| TraesCS4A01G058200.1 | Wheat | cytosol | 33.29 | 49.71 |
| GSMUA_Achr10P... | Banana | cytosol | 5.9 | 23.81 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G297800.1 | EnsemblPlantsGene:TraesCS2A01G297800 | Gene3D:3.40.50.2000 | InterPro:Glyco_trans_1 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF471 |
| PFAM:PF00534 | SEG:seg | SUPFAM:SSF53756 | MapMan:5.3.3 | : | : |
Description
No Description!
Coordinates
chr2A:+:512225074..512229356
Molecular Weight (calculated)
85835.7 Da
IEP (calculated)
8.844
GRAVY (calculated)
-0.432
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDNPPPIT GSSRDDGAFA FISKGWREVR DSATADLQLM RTRTDRELGR LLSSASALAG PGPAPPVAAG APFAELELVR KRIQPKIAEL RKQYSATVLD
101: GWSPKSGASL RIDLSGIMAI RNAIVSSGKA GGCDEGKKEW EVVKMIRNRL KEFERRSLSS EMSAGFRVRT DFVEKFKLSL KSMNKESQEP KQDAPPLDLT
201: EILAYLVRQS GPFLDQLGVQ RDLCEKLVGT LYSKRNGRLM HPPFSGDRSL IGSEDITDEL DLRIARVLES TGYHREGFWN DPAKYKISDN RRHVAIVTTA
301: SLPWMTGTAI NPLFRAAYLA RSTMEKVTLV VPWLCKSDQQ LVYPDNITFS SPEEQETYIR NWLQERLGFA ASFKISFYPG KFSKERRSII PAGDTSEFIP
401: SREADIAILE EPEHLNWYHH GKRWTDKFNH VIGVVHTNYL EYIKREKNGA LQAFLVKHIN NWVTRAYCHK VLRLSAATQD LPRSIICNVH GVNPKFLNIG
501: EKVIADRERG HNSFSKGAYF LGKMVWAKGY KELIDLLHKH KNDLEGFKLD VYGNGEDSQA VEAAARKLDL GINFYKGKDH ADDSLHGYKV FINPSVSDVL
601: CTATAEALAM GKFVICPDHP SNEFFKSFPN CLMYKTPEEF VARVKEAMSS EPQPLTPEKR YSLSWEAATE RFMEYSELDK VLKDRNGQCG EGVKRKGVRK
701: LPLLPKFSDI LDGGLAFAHY CATGNEILRM ATGATPGTRD YDKQQCMDLN LLPPQIQHPV YGL
101: GWSPKSGASL RIDLSGIMAI RNAIVSSGKA GGCDEGKKEW EVVKMIRNRL KEFERRSLSS EMSAGFRVRT DFVEKFKLSL KSMNKESQEP KQDAPPLDLT
201: EILAYLVRQS GPFLDQLGVQ RDLCEKLVGT LYSKRNGRLM HPPFSGDRSL IGSEDITDEL DLRIARVLES TGYHREGFWN DPAKYKISDN RRHVAIVTTA
301: SLPWMTGTAI NPLFRAAYLA RSTMEKVTLV VPWLCKSDQQ LVYPDNITFS SPEEQETYIR NWLQERLGFA ASFKISFYPG KFSKERRSII PAGDTSEFIP
401: SREADIAILE EPEHLNWYHH GKRWTDKFNH VIGVVHTNYL EYIKREKNGA LQAFLVKHIN NWVTRAYCHK VLRLSAATQD LPRSIICNVH GVNPKFLNIG
501: EKVIADRERG HNSFSKGAYF LGKMVWAKGY KELIDLLHKH KNDLEGFKLD VYGNGEDSQA VEAAARKLDL GINFYKGKDH ADDSLHGYKV FINPSVSDVL
601: CTATAEALAM GKFVICPDHP SNEFFKSFPN CLMYKTPEEF VARVKEAMSS EPQPLTPEKR YSLSWEAATE RFMEYSELDK VLKDRNGQCG EGVKRKGVRK
701: LPLLPKFSDI LDGGLAFAHY CATGNEILRM ATGATPGTRD YDKQQCMDLN LLPPQIQHPV YGL
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.