Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G297800.1 | Wheat | cytosol | 83.6 | 95.54 |
| TraesCS2D01G295800.2 | Wheat | cytosol | 89.22 | 88.31 |
| HORVU2Hr1G073850.5 | Barley | cytosol | 73.74 | 79.28 |
| Zm00001d003750_P001 | Maize | cytosol | 68.12 | 75.86 |
| EES10780 | Sorghum | cytosol | 68.46 | 75.76 |
| Os04t0416900-01 | Rice | cytosol, mitochondrion | 6.65 | 75.32 |
| Zm00001d039953_P001 | Maize | cytosol | 16.4 | 72.59 |
| TraesCS4B01G210400.1 | Wheat | mitochondrion | 30.05 | 52.51 |
| TraesCS4B01G246700.1 | Wheat | mitochondrion | 27.98 | 51.26 |
| GSMUA_Achr10P... | Banana | cytosol | 5.16 | 23.81 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G314000.1 | EnsemblPlantsGene:TraesCS2B01G314000 | Gene3D:3.40.50.2000 | InterPro:Glyco_trans_1 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF471 |
| PFAM:PF00534 | SEG:seg | SUPFAM:SSF53756 | MapMan:5.3.3 | : | : |
Description
No Description!
Coordinates
chr2B:+:449164708..449168903
Molecular Weight (calculated)
97508.5 Da
IEP (calculated)
9.406
GRAVY (calculated)
-0.444
Length
872 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAGRNRKGN VSRASTTHLD IPRPTGPSVA IRAADLWRPV VPAHMGRAPE PNQNLSLPSP WPSSTPPSSS CPVPIRPTII SRLATVLRAS RTQSLANPTL
101: DPNSPAYSRD MGVDNPPPIT GSGRDGDAFA FISKGWREVR DSATADLQLM RTRTDRELGR LLASASALAG PGPAQPVAAG APFAELEFVR KRIQPKIAEL
201: RKQYSSTVLD GWPPKSGASL RVDLSGITAI RNAIVSSGKA DGGDEGKEWE VVRMIRNGLK EFERRSLSSE MSAGFRVRTD FVEKFKLSLK SMNKESQEPK
301: QDAPPLNLTE ILAYLVRQSG PFLDQLGVQR DLCEKLVDTL YSKRNGRLMH PPFSGDRSLI GNEDITNELD LRIARVLEST GYHREGFWND PSKYKISDNR
401: RHVAIVTTAS LPWMTGTAIN PLFRAAYLAR STMQKVTLVV PWLCKSDQQL VYPDNITFCS PEEQETYIRN WLQERLGFAA NFKISFYPGK FSKERRSIIP
501: AGDTSEFISS GEADIAILEE PEHLNWYHHG KRWTDKFNHV IGVVHTNYLE YIKREKNGAL QAFLVKHINN WVTRAYCHKV LRLSAATQDL PRSIICNVHG
601: VNPKFLNIGE KVIADRERGH NSFSKGAYFL GKMVWAKGYK ELIDLLYKHK NDLEGFKLDV YGNGEDSQAV QAAARKLDLG INFYKGKDHA DDSLHGYKVF
701: INPSVSDVLC TATAEALAMG KFVICPDHPS NEFFKSFPNC LMYRTPEEFV ARVKEAMSSE PQPLTPEKRY SLSWEAATER FMQYSELDKV LKDRNAQCGE
801: GVKRKGVRKL PLLPKFSDIL DGGLAFAHYC ATGNEILRMA TGATPGTRDY DKQQCMDLNL LPPQIQHPVY GL
101: DPNSPAYSRD MGVDNPPPIT GSGRDGDAFA FISKGWREVR DSATADLQLM RTRTDRELGR LLASASALAG PGPAQPVAAG APFAELEFVR KRIQPKIAEL
201: RKQYSSTVLD GWPPKSGASL RVDLSGITAI RNAIVSSGKA DGGDEGKEWE VVRMIRNGLK EFERRSLSSE MSAGFRVRTD FVEKFKLSLK SMNKESQEPK
301: QDAPPLNLTE ILAYLVRQSG PFLDQLGVQR DLCEKLVDTL YSKRNGRLMH PPFSGDRSLI GNEDITNELD LRIARVLEST GYHREGFWND PSKYKISDNR
401: RHVAIVTTAS LPWMTGTAIN PLFRAAYLAR STMQKVTLVV PWLCKSDQQL VYPDNITFCS PEEQETYIRN WLQERLGFAA NFKISFYPGK FSKERRSIIP
501: AGDTSEFISS GEADIAILEE PEHLNWYHHG KRWTDKFNHV IGVVHTNYLE YIKREKNGAL QAFLVKHINN WVTRAYCHKV LRLSAATQDL PRSIICNVHG
601: VNPKFLNIGE KVIADRERGH NSFSKGAYFL GKMVWAKGYK ELIDLLYKHK NDLEGFKLDV YGNGEDSQAV QAAARKLDLG INFYKGKDHA DDSLHGYKVF
701: INPSVSDVLC TATAEALAMG KFVICPDHPS NEFFKSFPNC LMYRTPEEFV ARVKEAMSSE PQPLTPEKRY SLSWEAATER FMQYSELDKV LKDRNAQCGE
801: GVKRKGVRKL PLLPKFSDIL DGGLAFAHYC ATGNEILRMA TGATPGTRDY DKQQCMDLNL LPPQIQHPVY GL
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.