Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G297800.1 | Wheat | cytosol | 84.22 | 97.25 |
| TraesCS2B01G314000.1 | Wheat | mitochondrion | 88.31 | 89.22 |
| HORVU2Hr1G073850.5 | Barley | cytosol | 74.23 | 80.64 |
| Zm00001d003750_P001 | Maize | cytosol | 67.88 | 76.37 |
| EES10780 | Sorghum | cytosol | 68.1 | 76.14 |
| Zm00001d039953_P001 | Maize | cytosol | 16.57 | 74.11 |
| Os04t0416900-01 | Rice | cytosol, mitochondrion | 6.47 | 74.03 |
| TraesCS4D01G112200.1 | Wheat | nucleus | 51.76 | 62.72 |
| TraesCS4D01G211200.1 | Wheat | mitochondrion | 29.97 | 52.91 |
| TraesCS4D01G246000.1 | Wheat | mitochondrion | 28.04 | 51.89 |
| GSMUA_Achr10P... | Banana | cytosol | 5.11 | 23.81 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G295800.2 | EnsemblPlantsGene:TraesCS2D01G295800 | Gene3D:3.40.50.2000 | InterPro:Glyco_trans_1 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF471 |
| PFAM:PF00534 | SEG:seg | SUPFAM:SSF53756 | MapMan:5.3.3 | : | : |
Description
No Description!
Coordinates
chr2D:+:378052929..378057440
Molecular Weight (calculated)
98570.6 Da
IEP (calculated)
9.116
GRAVY (calculated)
-0.464
Length
881 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKCFETENV GRTEPKRKGN VSRATTHEDI PRPTGPSVAI RAADICRPVV LAHMGRAPEP NQNLSLPSPW PSSTPPSSSS PVPTAPTISR LATVLRASRT
101: QSLANLTLDP SPPAYSRDMG VDNPPPITGS GSDDGAFAFI SKGWREVRDS ATADLQLMRT RTDRELGRLL ASASALAGPG PAPPVAAGAP FAELEFVRKR
201: IQPKIAELRK QYSSTVLDGW PPKSGASLRV DLSGITAIRN AIVSSGKADG GDEGNKEWEV VKMIRNGLKE FERRSLSSEM SAGFRVRTDF VEKFKLSLKS
301: MNKESQEPKQ DAPPLDLTEI LAYLVRQSGP FLDQLGVQRD LCEKLVDTLY SKRNGRLMHP PFSGDRSLIR NEDITDELDL RIARVLESTG YHREGFWNDP
401: AKYKISDNRR HVAIVTTASL PWMTGTAINP LFRAAYLARS TMQKVTLVVP WLCKSDQQLV YPDNITFSSP EEQETYIRNW LQERLGFAAN FKISFYPGKF
501: SKERRSIIPA GDTSEFISSR EADIAILEEP EHLNWYHHGK RWTDKFNHVI GVVHTNYLEY IKREKNGALQ AFLVKHINNW VTRAYCHKVL RLSAATQDLP
601: RSIICNVHGV NPKFLNIGEK VIADRERGHN SFSKGAYFLG KMVWAKGYKE LIDLLYKHKN DLEGFKLDVY GNGEDSQAVQ AAARKLDLGI NFYKGKDHAD
701: DSLHGYKVFI NPSVSDVLCT ATAEALAMGK FVICPDHPSN EFFKSFPNCL MYKTPEEFVA RVKEAMSSEP QPLTPEKRYS LSWEAATERF MEYSELDKVL
801: KDRNGQCGEG VKRKGVRKLR LLPKFSDILD GGLAFAHYCA TGNEILRMAT GATPGTRDYD KQQCMDLNLL PPQIQHPVYG L
101: QSLANLTLDP SPPAYSRDMG VDNPPPITGS GSDDGAFAFI SKGWREVRDS ATADLQLMRT RTDRELGRLL ASASALAGPG PAPPVAAGAP FAELEFVRKR
201: IQPKIAELRK QYSSTVLDGW PPKSGASLRV DLSGITAIRN AIVSSGKADG GDEGNKEWEV VKMIRNGLKE FERRSLSSEM SAGFRVRTDF VEKFKLSLKS
301: MNKESQEPKQ DAPPLDLTEI LAYLVRQSGP FLDQLGVQRD LCEKLVDTLY SKRNGRLMHP PFSGDRSLIR NEDITDELDL RIARVLESTG YHREGFWNDP
401: AKYKISDNRR HVAIVTTASL PWMTGTAINP LFRAAYLARS TMQKVTLVVP WLCKSDQQLV YPDNITFSSP EEQETYIRNW LQERLGFAAN FKISFYPGKF
501: SKERRSIIPA GDTSEFISSR EADIAILEEP EHLNWYHHGK RWTDKFNHVI GVVHTNYLEY IKREKNGALQ AFLVKHINNW VTRAYCHKVL RLSAATQDLP
601: RSIICNVHGV NPKFLNIGEK VIADRERGHN SFSKGAYFLG KMVWAKGYKE LIDLLYKHKN DLEGFKLDVY GNGEDSQAVQ AAARKLDLGI NFYKGKDHAD
701: DSLHGYKVFI NPSVSDVLCT ATAEALAMGK FVICPDHPSN EFFKSFPNCL MYKTPEEFVA RVKEAMSSEP QPLTPEKRYS LSWEAATERF MEYSELDKVL
801: KDRNGQCGEG VKRKGVRKLR LLPKFSDILD GGLAFAHYCA TGNEILRMAT GATPGTRDYD KQQCMDLNLL PPQIQHPVYG L
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.