Factsheet for TraesCS4A01G058200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G246700.1	Wheat	mitochondrion	91.59	98.32
TraesCS4D01G246000.1	Wheat	mitochondrion	91.39	98.11
HORVU4Hr1G067920.1	Barley	mitochondrion	90.8	97.48
EER92641	Sorghum	golgi	79.45	85.47
Zm00001d028211_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	78.86	84.84
Os03t0214400-01	Rice	plasma membrane	77.69	83.4
GSMUA_AchrUn_...	Banana	cytosol	63.8	69.07
VIT_11s0016g00030.t01	Wine grape	cytosol	40.51	69.0
KRH00685	Soybean	cytosol	59.3	65.44
KRH40509	Soybean	cytosol	59.3	65.44
VIT_15s0046g03730.t01	Wine grape	cytosol	58.32	63.95
TraesCS4A01G093900.1	Wheat	mitochondrion	60.47	61.92
CDY07210	Canola	mitochondrion	57.53	61.76
AT4G00550.1	Thale cress	cytosol	57.14	61.73
CDY51152	Canola	mitochondrion, plastid	57.93	61.67
KRH15982	Soybean	cytosol	14.09	61.54
Bra037346.1-P	Field mustard	mitochondrion, plastid	57.53	61.12
PGSC0003DMT400000445	Potato	endoplasmic reticulum	54.6	60.39
Solyc01g094170.2.1	Tomato	cytosol	48.53	58.91
PGSC0003DMT400026609	Potato	cytosol	52.84	58.57
Solyc10g017580.2.1	Tomato	cytosol	52.25	57.92
VIT_07s0141g01080.t01	Wine grape	cytosol	9.78	44.64
TraesCS4A01G200600.1	Wheat	nucleus	47.75	33.52
TraesCS2A01G297800.1	Wheat	cytosol	49.71	33.29

Protein Annotations

EnsemblPlants:TraesCS4A01G058200.1	EnsemblPlantsGene:TraesCS4A01G058200	Gene3D:3.40.50.2000	ncoils:Coil	PANTHER:PTHR12526	PANTHER:PTHR12526:SF460
PFAM:PF13692	SUPFAM:SSF53756	MapMan:5.3.3	:	:	:

Description

No Description!

Coordinates

chr4A:-:48904888..48908236

Molecular Weight (calculated)

58598.4 Da

IEP (calculated)

8.566

GRAVY (calculated)

-0.384

Length

511 amino acids

Sequence
(BLAST)

001: MHILMPFPVT GEVTRQRADR PKFGWNSQCS CTLHAMSARR HFAVFTTASL PWMTGTSINP LFRAAYLAKD GGRDVTLVIP WLSLRDQELV YPNKIVFDSP
101: LEQEGYVRRW IEERVDFRPS FSIKFYPAKF SKEMRSILPV GDITECIPDE MADIAVLEEP EHLNWYHHGR RWKNKFRRVI GVIHTNYLAY VRREKNGQVI
201: ACCLRYANTW VTRIYCHKII RLSGATQDLP KSVICNVHGV NPKFLEVGRL KLKQLQNGEA SFTKGAYYIG KMVWSKGYRE LLDLLSKYQS RLSDLEVDLY
301: GSGEDSDEIQ ESAERLSLAV NVHPGRDHAD PLFHDYKVFI NPSTTDVVCT TSAEALAMGK IVICANHPSN EFFKQFPNCR IYNNDEEFVQ LTLNALAEQP
401: TPLTDMQMYD LSWEAATDRF MEAAEINLPT AEPRIQQASK TYFPTFLRTR KLKQSLEDAS VYLHQALSGL EVTRCAFGAV PKTLQPDEQL RKDLGLASPP
501: KRKKQKQKLM T

Best Arabidopsis Sequence Match ( AT4G00550.2 )
(BLAST)

001: MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID
101: KRSILPVGDI SDAIPDEEAD IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG IYCHKVIRLS AATQEYPKSI
201: VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF
301: HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD
401: SNLSKRSVFA SSSISVGKNL EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD

Arabidopsis Description

DGD2Digalactosyldiacylglycerol synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W1S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.