Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016731_P001 | Maize | nucleus | 91.29 | 91.29 |
| Zm00001d053174_P001 | Maize | cytosol | 15.03 | 88.15 |
| Os02t0539100-01 | Rice | cytosol, mitochondrion, nucleus | 78.03 | 77.06 |
| EES10780 | Sorghum | cytosol | 71.09 | 71.45 |
| KXG27790 | Sorghum | nucleus | 61.49 | 65.99 |
| Zm00001d043881_P001 | Maize | plastid | 13.64 | 58.06 |
| EER92494 | Sorghum | golgi | 32.07 | 54.74 |
| Zm00001d018594_P001 | Maize | plastid | 11.87 | 54.65 |
| EER92641 | Sorghum | golgi | 32.32 | 53.89 |
| Zm00001d025459_P001 | Maize | plastid | 19.7 | 47.85 |
| Zm00001d005882_P004 | Maize | cytosol | 20.33 | 47.08 |
Protein Annotations
| Gene3D:3.40.50.2000 | MapMan:5.3.3 | EntrezGene:8064233 | UniProt:C5XU20 | EnsemblPlants:EES05202 | ProteinID:EES05202 |
| ProteinID:EES05202.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009536 |
| GO:GO:0009707 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019375 | GO:GO:0035250 |
| InterPro:Glyco_trans_1 | PFAM:PF00534 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF532 | EnsemblPlantsGene:SORBI_3004G169000 | SUPFAM:SSF53756 |
| unigene:Sbi.20573 | UniParc:UPI0001A85760 | RefSeq:XP_002452226.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:51972203..51977473
Molecular Weight (calculated)
88992.2 Da
IEP (calculated)
6.702
GRAVY (calculated)
-0.510
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MEARASPRPS ISIGGGFGAG RGDDSAFSFL SKGWREVRDS ATADLRLMRA RADSLRTLAD RELENLLASA STALASAPPP PLAAGAPIAE LEFVRTRIQP
101: KISELRRRYA SRERELGRRV LEGWAPRGAG GPARARVDLS GITAIRNAIV SEVDGGERWR RAVWSGEAEA EEGKEWEVVR MIRDGIKEFE RRSQTSEIFE
201: GLRSTGELVE KFKSSLKSFN MESQGSKEIP PLDLPEILAN LVRQSEPFLD QLGIRRDQCD KLVEALCRKQ NHSLSEDTSL HVNDKSSDEL DLRIASVLQS
301: TGYHADDGFW SDPGKYEVSD NKRHVAVVTT ASLPWMTGTA VNPLFRAAYL AKGTRQDVTL VVPWLCKSDQ ELVYPNSMTF NSPEEQEAYI RSWLEERLGF
401: ESNFKISFYP GKFSKERRSI IPAGDTSQFI PSREADIAIL EEPEHLNWYH HGKRWTDKFN HVVGVVHTNY LEYIKREKNG ALQAFLVKHI NNWVTRAYCD
501: KVLRLSAATQ DLPKSIVCNV HGVNPKFLKI GEEITANRET GEAPFSKGAY FLGKMVWAKG YRELIDLMAK HKSDLEGFKL DVYGSGEDSQ EVQSTARKLD
601: LSLNFFKGRD HADNSLHGYK VFINPSISDV LCTATAEALA MGKFVICAEH PSNEFFMTFP NCLTYKTSEE FVARVKEAMD REPQPLTPEQ RYNLSWEAAT
701: ERFMEYSDLD KVLNNEAAQP GQGRNRKNTR TSQPNLSDIM DGGLAFAHRC LTGNEVLRLA TGAIPGTRDY DKQHCIDMGL LPPQVQHPVY GW
101: KISELRRRYA SRERELGRRV LEGWAPRGAG GPARARVDLS GITAIRNAIV SEVDGGERWR RAVWSGEAEA EEGKEWEVVR MIRDGIKEFE RRSQTSEIFE
201: GLRSTGELVE KFKSSLKSFN MESQGSKEIP PLDLPEILAN LVRQSEPFLD QLGIRRDQCD KLVEALCRKQ NHSLSEDTSL HVNDKSSDEL DLRIASVLQS
301: TGYHADDGFW SDPGKYEVSD NKRHVAVVTT ASLPWMTGTA VNPLFRAAYL AKGTRQDVTL VVPWLCKSDQ ELVYPNSMTF NSPEEQEAYI RSWLEERLGF
401: ESNFKISFYP GKFSKERRSI IPAGDTSQFI PSREADIAIL EEPEHLNWYH HGKRWTDKFN HVVGVVHTNY LEYIKREKNG ALQAFLVKHI NNWVTRAYCD
501: KVLRLSAATQ DLPKSIVCNV HGVNPKFLKI GEEITANRET GEAPFSKGAY FLGKMVWAKG YRELIDLMAK HKSDLEGFKL DVYGSGEDSQ EVQSTARKLD
601: LSLNFFKGRD HADNSLHGYK VFINPSISDV LCTATAEALA MGKFVICAEH PSNEFFMTFP NCLTYKTSEE FVARVKEAMD REPQPLTPEQ RYNLSWEAAT
701: ERFMEYSDLD KVLNNEAAQP GQGRNRKNTR TSQPNLSDIM DGGLAFAHRC LTGNEVLRLA TGAIPGTRDY DKQHCIDMGL LPPQVQHPVY GW
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
Arabidopsis Description
DGD1DGD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VKL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.