Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 5
- plasma membrane 5
- plastid 1
- extracellular 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73209 | Soybean | extracellular, mitochondrion, plasma membrane | 96.77 | 71.43 |
| VIT_06s0004g01050.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 40.32 | 59.52 |
| KRH43573 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 50.41 |
| AT5G19875.1 | Thale cress | plasma membrane | 49.19 | 49.59 |
| Bra006523.1-P | Field mustard | plasma membrane | 49.19 | 49.59 |
| CDX70897 | Canola | plasma membrane | 49.19 | 49.59 |
| CDY68096 | Canola | plasma membrane | 49.19 | 49.59 |
| KRH13847 | Soybean | plasma membrane | 49.19 | 49.19 |
| Bra002268.1-P | Field mustard | plasma membrane | 48.39 | 48.78 |
| CDX88869 | Canola | plasma membrane | 48.39 | 48.78 |
| GSMUA_Achr3P20200_001 | Banana | plasma membrane | 37.1 | 44.23 |
| EER96812 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 45.16 | 43.75 |
| Zm00001d020655_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 44.35 | 41.04 |
| TraesCS5B01G229900.1 | Wheat | plasma membrane | 42.74 | 40.77 |
| TraesCS5D01G236400.1 | Wheat | plasma membrane | 42.74 | 40.77 |
| TraesCS5A01G231600.1 | Wheat | plasma membrane | 41.94 | 40.0 |
| Os09t0445600-01 | Rice | cytosol, plasma membrane, vacuole | 42.74 | 38.13 |
Protein Annotations
| EMBL:ACUP02008536 | EnsemblPlants:KRH14864 | EnsemblPlantsGene:GLYMA_14G053000 | EntrezGene:100805825 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR33306 | PANTHER:PTHR33306:SF10 | ProteinID:KRH14864 | ProteinID:KRH14864.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000233AE5A | UniProt:I1M7M2 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr14:+:4189645..4190683
Molecular Weight (calculated)
14754.2 Da
IEP (calculated)
6.673
GRAVY (calculated)
0.747
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MARYHDPYYY YLWEYFSFPL HLVFFVFILF FVLAFSWYIN YESLFEDLLV QVKIFLALVP LLLLLLVHCL SSGASFPIPL PEERESLHRA GGSPWGVALL
101: LLFVLFMMAY QSSFHQRWFP LATR
101: LLFVLFMMAY QSSFHQRWFP LATR
001: MARSPYYGSS YLDYLSLPNP HLCFLFIVVF FVLSFTWYLN FESIIEDTLD HLKLVFIFTP LFLLLLVHFF SGGLSFYVPW PEQDSIHRAG SSPWGVAAVL
101: VLILFMVSYQ SDFQERWFPF GAK
101: VLILFMVSYQ SDFQERWFPF GAK
Arabidopsis Description
At5g19875 [Source:UniProtKB/TrEMBL;Acc:Q8L9M7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.