Factsheet for Os09t0445600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
plasma membrane 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0101800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19875.1	Os06t0101800-01	AT1G01010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G236400.1	Wheat	plasma membrane	75.54	80.77
TraesCS5B01G229900.1	Wheat	plasma membrane	75.54	80.77
TraesCS5A01G231600.1	Wheat	plasma membrane	72.66	77.69
EER96812	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	66.91	72.66
Zm00001d020655_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	68.35	70.9
GSMUA_Achr3P20200_001	Banana	plasma membrane	40.29	53.85
KRH43573	Soybean	endoplasmic reticulum, plasma membrane, vacuole	46.76	52.85
Bra005617.1-P	Field mustard	endoplasmic reticulum	44.6	52.1
CDY42077	Canola	endoplasmic reticulum	44.6	52.1
PGSC0003DMT400074570	Potato	endoplasmic reticulum, plasma membrane, vacuole	43.88	51.69
KRH13847	Soybean	plasma membrane	46.04	51.61
VIT_06s0004g01050.t01	Wine grape	endoplasmic reticulum, plasma membrane	30.94	51.19
VIT_13s0156g00100.t01	Wine grape	plasma membrane	45.32	50.81
CDY60509	Canola	plasma membrane	43.17	50.42
Solyc10g044880.1.1	Tomato	plasma membrane	38.85	48.65
AT2G31940.1	Thale cress	endoplasmic reticulum, plasma membrane	41.73	48.33
PGSC0003DMT400041206	Potato	plasma membrane	38.13	47.75
KRH14864	Soybean	endoplasmic reticulum	38.13	42.74
CDY68096	Canola	plasma membrane	37.41	42.28
AT5G19875.1	Thale cress	plasma membrane	37.41	42.28
Bra002268.1-P	Field mustard	plasma membrane	36.69	41.46
CDX88869	Canola	plasma membrane	34.53	39.02
CDX70897	Canola	plasma membrane	34.53	39.02
Bra006523.1-P	Field mustard	plasma membrane	34.53	39.02
KRH73209	Soybean	extracellular, mitochondrion, plasma membrane	38.13	31.55

Protein Annotations

EMBL:AK107839	EnsemblPlants:Os09t0445600-01	EnsemblPlantsGene:Os09g0445600	EntrezGene:4347198	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33306	PANTHER:PTHR33306:SF10	ProteinID:BAD38322.1	ProteinID:BAF25218.1	ProteinID:BAT08337.1
RefSeq:XP_015611396.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0000426528	UniProt:Q67U49	MapMan:35.2

Description

Similar to oxidoreductase/ transition metal ion binding protein. (Os09t0445600-01)

Coordinates

chr9:+:16618039..16618783

Molecular Weight (calculated)

15085.4 Da

IEP (calculated)

9.093

GRAVY (calculated)

0.329

Length

139 amino acids

Sequence
(BLAST)

001: MGNSYSNGGS PAAAAGYVQA PELPLHLCFF LVVLLVFLGF SWYTSYGSAA ERFADQARLL LMASPLALLL AVRLLSGGGD GERRGVDQLR QLSLPMPERD
101: SIHRAGGSPW GVGVLLALLV VMVSYQSNFR DRWFPLVSR

Best Arabidopsis Sequence Match ( AT5G19875.1 )
(BLAST)

001: MARSPYYGSS YLDYLSLPNP HLCFLFIVVF FVLSFTWYLN FESIIEDTLD HLKLVFIFTP LFLLLLVHFF SGGLSFYVPW PEQDSIHRAG SSPWGVAAVL
101: VLILFMVSYQ SDFQERWFPF GAK

Arabidopsis Description

At5g19875 [Source:UniProtKB/TrEMBL;Acc:Q8L9M7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.