Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74668 | Soybean | extracellular, plasma membrane | 54.77 | 57.2 |
| KRH69485 | Soybean | mitochondrion | 54.06 | 56.46 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 53.0 | 55.76 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 53.0 | 55.76 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 50.53 | 52.77 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 49.47 | 52.63 |
| CDY09918 | Canola | cytosol, plasma membrane | 48.41 | 52.49 |
| CDY68059 | Canola | cytosol, plasma membrane | 48.76 | 51.88 |
| CDY51371 | Canola | cytosol | 46.29 | 50.38 |
| AT2G29390.1 | Thale cress | cytosol | 48.41 | 50.37 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 48.76 | 50.0 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 46.29 | 49.43 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 46.29 | 49.43 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 46.29 | 49.25 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 45.58 | 48.31 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 44.88 | 47.74 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 44.52 | 47.73 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 44.52 | 47.37 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 44.52 | 47.37 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 44.17 | 46.64 |
| Zm00001d048585_P002 | Maize | plasma membrane | 43.82 | 46.27 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 43.82 | 46.27 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 43.11 | 46.04 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 42.76 | 45.49 |
| GSMUA_Achr10P... | Banana | cytosol | 45.58 | 42.3 |
| CDX97889 | Canola | golgi, plasma membrane | 46.64 | 41.77 |
| CDY06258 | Canola | cytosol | 3.18 | 40.91 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 45.58 | 40.19 |
| CDY06257 | Canola | cytosol, plastid | 22.97 | 32.66 |
| CDX86488 | Canola | cytosol | 48.41 | 27.62 |
| Bra030681.1-P | Field mustard | cytosol | 48.06 | 26.31 |
| KRH57309 | Soybean | endoplasmic reticulum | 26.5 | 25.25 |
| KRH57571 | Soybean | plastid | 9.89 | 25.0 |
| CDY10274 | Canola | cytosol | 48.06 | 24.77 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 25.44 | 24.57 |
| KRH04041 | Soybean | endoplasmic reticulum | 18.02 | 23.39 |
Protein Annotations
| MapMan:5.5.2.1 | UniProt:A0A0R0LFK7 | EMBL:ACUP02000058 | InterPro:Fatty_acid_hydroxylase | EnsemblPlantsGene:GLYMA_01G035200 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlants:KRH74671 | ProteinID:KRH74671 | ProteinID:KRH74671.1 | PFAM:PF04116 | PANTHER:PTHR11863 |
| PANTHER:PTHR11863:SF96 | TMHMM:TMhelix | UniParc:UPI0006EE1529 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:3645633..3650030
Molecular Weight (calculated)
33438.0 Da
IEP (calculated)
8.658
GRAVY (calculated)
0.246
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFFIQSAWQ VLIPHFCDFQ LACLATFFLH EGVFFLSGLP YLLLERTGWL SKYKIQGKNN SPAAQDKCIT RLMLCHFGVN LPVMIISYPV FKYMTIYFWF
101: CRKIIFTQIT FYFILEDFVF YWGHRILHTK CLYTNVHSVH HEKELCVFRG YHFPWSLSNF IPLYGGADLH DYHHWLLYTK SANYSSTPYL HGLSIPVLYP
201: VQLLIPFTDI FWGYFSILEG IAPLKQKYCP LTYSNLTLHI LTLYFLISMI ISNIWVFGTD IGYKKLKASK RAEAEYSREQ KEH
101: CRKIIFTQIT FYFILEDFVF YWGHRILHTK CLYTNVHSVH HEKELCVFRG YHFPWSLSNF IPLYGGADLH DYHHWLLYTK SANYSSTPYL HGLSIPVLYP
201: VQLLIPFTDI FWGYFSILEG IAPLKQKYCP LTYSNLTLHI LTLYFLISMI ISNIWVFGTD IGYKKLKASK RAEAEYSREQ KEH
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.