Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 2
- golgi 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 96.55 | 94.74 |
| CDY68059 | Canola | cytosol, plasma membrane | 96.55 | 94.74 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 95.4 | 90.22 |
| CDY51371 | Canola | cytosol | 85.82 | 86.15 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 86.97 | 84.39 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 86.59 | 84.01 |
| KRH69485 | Soybean | mitochondrion | 85.82 | 82.66 |
| KRH74668 | Soybean | extracellular, plasma membrane | 85.82 | 82.66 |
| CDY06258 | Canola | cytosol | 6.9 | 81.82 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 83.52 | 80.44 |
| CDY06257 | Canola | cytosol, plastid | 58.24 | 76.38 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 77.01 | 75.85 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 76.25 | 75.38 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 77.01 | 75.28 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 76.25 | 74.81 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 75.86 | 74.72 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 73.56 | 71.64 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 72.41 | 71.05 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 72.8 | 70.9 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 72.03 | 70.68 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 72.03 | 70.68 |
| Zm00001d048585_P002 | Maize | plasma membrane | 72.41 | 70.52 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 71.65 | 70.3 |
| CDX97889 | Canola | golgi, plasma membrane | 85.06 | 70.25 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 70.88 | 69.81 |
| GSMUA_Achr10P... | Banana | cytosol | 76.63 | 65.57 |
| CDX86488 | Canola | cytosol | 92.34 | 48.59 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 52.49 | 48.41 |
| CDY10274 | Canola | cytosol | 91.57 | 43.53 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.27 | 43.41 |
| CDX97357 | Canola | cytosol | 40.61 | 37.86 |
| CDY41295 | Canola | cytosol | 35.63 | 36.05 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 40.61 | 35.57 |
| CDY41294 | Canola | cytosol | 40.23 | 35.23 |
| CDX82968 | Canola | plasma membrane | 40.23 | 27.93 |
| CDX94121 | Canola | cytosol | 20.69 | 21.86 |
Protein Annotations
| MapMan:5.5.2.1 | GO:A0A078FCY7 | UniProt:A0A078FCY7 | EnsemblPlants:CDY09918 | ProteinID:CDY09918 | ProteinID:CDY09918.1 |
| InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00031685001 | PFAM:PF04116 | PANTHER:PTHR11863 |
| PANTHER:PTHR11863:SF96 | TMHMM:TMhelix | UniParc:UPI0004EC7C39 | : | : | : |
Description
BnaC08g45330DBnaC08g45330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCY7]
Coordinates
chrLK032000:-:83042..85477
Molecular Weight (calculated)
30348.9 Da
IEP (calculated)
8.783
GRAVY (calculated)
0.140
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFCVN LPLMMASYPV FTAMGMRSSF
101: PLPSWKEVSG QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTHKG YRRLKSLKEK Q
101: PLPSWKEVSG QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTHKG YRRLKSLKEK Q
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [golgi,endoplasmic reticulum]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.