Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74668 | Soybean | extracellular, plasma membrane | 85.98 | 85.98 |
| KRH69485 | Soybean | mitochondrion | 85.61 | 85.61 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 82.29 | 83.83 |
| CDY09918 | Canola | cytosol, plasma membrane | 80.44 | 83.52 |
| CDY68059 | Canola | cytosol, plasma membrane | 81.92 | 83.46 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 82.66 | 83.27 |
| VIT_13s0019g02210.t01 | Wine grape | extracellular, golgi | 83.76 | 83.15 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 82.29 | 82.9 |
| CDY06258 | Canola | cytosol | 6.64 | 81.82 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 83.03 | 81.52 |
| AT2G29390.1 | Thale cress | cytosol | 78.6 | 78.31 |
| CDY51371 | Canola | cytosol | 74.91 | 78.08 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 75.28 | 76.98 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 75.65 | 76.78 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 75.28 | 76.69 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 74.91 | 76.6 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 73.8 | 75.76 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 72.69 | 74.06 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 72.32 | 73.68 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 72.32 | 73.68 |
| Zm00001d048585_P002 | Maize | plasma membrane | 71.22 | 72.01 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 71.22 | 72.01 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 69.74 | 71.32 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 69.74 | 71.05 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 70.11 | 70.9 |
| CDY06257 | Canola | cytosol, plastid | 49.45 | 67.34 |
| GSMUA_Achr10P... | Banana | cytosol | 74.91 | 66.56 |
| CDX97889 | Canola | golgi, plasma membrane | 74.91 | 64.24 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 71.96 | 60.75 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 52.77 | 50.53 |
| CDX86488 | Canola | cytosol | 78.6 | 42.94 |
| Bra030681.1-P | Field mustard | cytosol | 78.97 | 41.39 |
| CDY10274 | Canola | cytosol | 79.7 | 39.34 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 29.89 | 36.65 |
Protein Annotations
| EntrezGene:100260328 | wikigene:100260328 | MapMan:5.5.2.1 | ProteinID:CBI16057 | ProteinID:CBI16057.3 | ncoils:Coil |
| UniProt:D7SK81 | EMBL:FN594951 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 |
| GO:GO:0055114 | GO:GO:0080065 | EntrezGene:LOC100260328 | wikigene:LOC100260328 | PFAM:PF04116 | PANTHER:PTHR11863 |
| PANTHER:PTHR11863:SF96 | TIGR:TC70578 | TMHMM:TMhelix | UniParc:UPI00015C80C3 | ArrayExpress:VIT_06s0004g05470 | EnsemblPlantsGene:VIT_06s0004g05470 |
| EnsemblPlants:VIT_06s0004g05470.t01 | unigene:Vvi.267 | RefSeq:XP_002282305 | RefSeq:XP_002282305.1 | : | : |
Description
No Description!
Coordinates
chr6:-:6322463..6330956
Molecular Weight (calculated)
31638.6 Da
IEP (calculated)
8.430
GRAVY (calculated)
0.215
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MASIIESGWL YLVTHFSDFQ LASLGSFFIH ESVFFLSGLP FIFLERAGWL GKYKIQRKMN SSAAQERCIM RLILYHFGVN LPVMIFSYPL FRYMGMQSSL
101: PLPSWKVVLT QIIFYFILED FVFYWGHRVL HTKWLYKHVH CVHHEYATPF GLTSEYAHPA EILFLGFATI VGPAITGPHL MTLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKALKSN EVEVEAGSKQ I
101: PLPSWKVVLT QIIFYFILED FVFYWGHRVL HTKWLYKHVH CVHHEYATPF GLTSEYAHPA EILFLGFATI VGPAITGPHL MTLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKALKSN EVEVEAGSKQ I
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.