Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 47.36 | 94.2 |
| CDY68059 | Canola | cytosol, plasma membrane | 45.17 | 93.23 |
| CDY09918 | Canola | cytosol, plasma membrane | 43.53 | 91.57 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 44.26 | 91.35 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 40.8 | 83.27 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 40.62 | 82.9 |
| CDY51371 | Canola | cytosol | 38.8 | 81.92 |
| KRH69485 | Soybean | mitochondrion | 40.26 | 81.55 |
| KRH74668 | Soybean | extracellular, plasma membrane | 39.89 | 80.81 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 39.34 | 79.7 |
| CDX86488 | Canola | cytosol | 70.49 | 78.02 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 36.43 | 75.47 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 36.61 | 75.28 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 36.07 | 75.0 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 35.52 | 73.58 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 35.52 | 73.31 |
| CDY06257 | Canola | cytosol, plastid | 26.23 | 72.36 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 34.97 | 72.18 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 34.79 | 71.8 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 34.79 | 71.8 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 34.97 | 71.64 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 34.97 | 71.64 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 34.43 | 71.05 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 34.24 | 70.94 |
| Zm00001d048585_P002 | Maize | plasma membrane | 34.61 | 70.9 |
| CDY06258 | Canola | cytosol | 2.73 | 68.18 |
| CDX97889 | Canola | golgi, plasma membrane | 38.8 | 67.41 |
| GSMUA_Achr10P... | Banana | cytosol | 36.98 | 66.56 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 24.77 | 48.06 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 14.94 | 45.05 |
| CDX97357 | Canola | cytosol | 19.13 | 37.5 |
| CDY41295 | Canola | cytosol | 17.3 | 36.82 |
| CDY41294 | Canola | cytosol | 19.85 | 36.58 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 19.49 | 35.91 |
| CDX82968 | Canola | plasma membrane | 19.85 | 28.99 |
| CDX94121 | Canola | cytosol | 10.75 | 23.89 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | MapMan:5.5.2.1 | GO:A0A078FB74 | UniProt:A0A078FB74 | EnsemblPlants:CDY10274 |
| ProteinID:CDY10274 | ProteinID:CDY10274.1 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0016787 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00032102001 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PFAM:PF04116 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | TMHMM:TMhelix | UniParc:UPI0004EE3827 | : | : |
Description
BnaC05g05170DBnaC05g05170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB74]
Coordinates
chrLK032001:+:862230..866280
Molecular Weight (calculated)
62959.8 Da
IEP (calculated)
9.394
GRAVY (calculated)
-0.160
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSVFMALY TEEERQRGNR KGNTQQQKKK KFHYRSFQLV LKGLIGRARI REGRQMANRI DHEYDYLFKI VLIGDSGVGK SNILSRFTRN EFCLESKSTI
101: GVEFATRTLQ VEGKTVKAQI WDTAGQERYR AITSAYYRGA VGALLVYDIT KRQTFENVLR WLRELRDHAD SNIVIMMAGN KSDLNHLRSV ADEDGRSLAE
201: KEGLSFLETS ALEASNIEKA FQTILSEIYH IISKKALAAQ EAAGNLQVPG QGTAINITDS SVAKKISDSL QICYPSMASL VWQYLVTHFS DFQLACIGSF
301: LLHESVFFLS GLPFIYLERQ GFLTKYKIQA KNNTPAAQEK CITRLLLYHF CVNLPLMMAS YPVFRAMGMR SSFPLPSWKE VSAQILFYFI IEDFVFYWGH
401: RILHTKWLYK TVHSVHHEYA TPFGLTSEYA HPAEILFLGF ATIVGPALTG PHLITLWLWM VLRVLETVEA HCGYHFPWSL SNFLPLYGGS LESKSYSRFA
501: DFHDYHHRLL YTKSGNYSST FVYMDWIFGT DKGYRRLKSL KENSDLKQT
101: GVEFATRTLQ VEGKTVKAQI WDTAGQERYR AITSAYYRGA VGALLVYDIT KRQTFENVLR WLRELRDHAD SNIVIMMAGN KSDLNHLRSV ADEDGRSLAE
201: KEGLSFLETS ALEASNIEKA FQTILSEIYH IISKKALAAQ EAAGNLQVPG QGTAINITDS SVAKKISDSL QICYPSMASL VWQYLVTHFS DFQLACIGSF
301: LLHESVFFLS GLPFIYLERQ GFLTKYKIQA KNNTPAAQEK CITRLLLYHF CVNLPLMMAS YPVFRAMGMR SSFPLPSWKE VSAQILFYFI IEDFVFYWGH
401: RILHTKWLYK TVHSVHHEYA TPFGLTSEYA HPAEILFLGF ATIVGPALTG PHLITLWLWM VLRVLETVEA HCGYHFPWSL SNFLPLYGGS LESKSYSRFA
501: DFHDYHHRLL YTKSGNYSST FVYMDWIFGT DKGYRRLKSL KENSDLKQT
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.