Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68059 | Canola | cytosol, plasma membrane | 95.45 | 7.89 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 95.45 | 7.61 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 90.91 | 7.52 |
| CDY09918 | Canola | cytosol, plasma membrane | 81.82 | 6.9 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 81.82 | 6.64 |
| CDY51371 | Canola | cytosol | 77.27 | 6.54 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 72.73 | 6.04 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 72.73 | 6.02 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 72.73 | 5.95 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 72.73 | 5.95 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 68.18 | 5.62 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.45 | 5.49 |
| CDX97889 | Canola | golgi, plasma membrane | 77.27 | 5.38 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 63.64 | 5.3 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 63.64 | 5.28 |
| KRH69485 | Soybean | mitochondrion | 63.64 | 5.17 |
| KRH74668 | Soybean | extracellular, plasma membrane | 63.64 | 5.17 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 59.09 | 4.89 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 59.09 | 4.85 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 54.55 | 4.51 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 54.55 | 4.51 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 54.55 | 4.51 |
| Zm00001d048585_P002 | Maize | plasma membrane | 54.55 | 4.48 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 54.55 | 4.48 |
| GSMUA_Achr10P... | Banana | cytosol | 59.09 | 4.26 |
| CDX94121 | Canola | cytosol | 45.45 | 4.05 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 45.45 | 3.77 |
| CDX97357 | Canola | cytosol | 45.45 | 3.57 |
| CDY41294 | Canola | cytosol | 45.45 | 3.36 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 40.91 | 3.18 |
| CDX86488 | Canola | cytosol | 68.18 | 3.02 |
| CDY10274 | Canola | cytosol | 68.18 | 2.73 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 36.36 | 2.68 |
| CDX82968 | Canola | plasma membrane | 45.45 | 2.66 |
| CDY41295 | Canola | cytosol | 0.0 | 0.0 |
| CDY06257 | Canola | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY06258 | EnsemblPlantsGene:GSBRNA2T00122175001 | ProteinID:CDY06258 | ProteinID:CDY06258.1 | UniParc:UPI0004EEEE42 | MapMan:35.2 |
Description
BnaA09g49450D
Coordinates
chrLK031968:+:498031..498176
Molecular Weight (calculated)
2660.1 Da
IEP (calculated)
9.219
GRAVY (calculated)
-1.214
Length
22 amino acids
Sequence
(BLAST)
(BLAST)
1: MDWIFGTDKG YRRLKSLKEN SD
001: MLLLPFMVNT YFSFVPMQTK NNTPAAQGKC ITRLLLYHFS VNLPLMLASY PVFRAMGMRS SFPLPSWKEV SAQILFYFII EDFVFYWGHR ILHSKWLYKN
101: VHSVHHEYAT PFGLTSEYAH PAEILFLGFA TIVGPALTGP HLITLWLWMV LRVLETVEAH CGYHFPWSLS NFLPLYGGAD FHDYHHRLLY TKSGNYSSTF
201: VYMDWIFGTD KGYRRLKTLK ENGDMKQT
101: VHSVHHEYAT PFGLTSEYAH PAEILFLGFA TIVGPALTGP HLITLWLWMV LRVLETVEAH CGYHFPWSLS NFLPLYGGAD FHDYHHRLLY TKSGNYSSTF
201: VYMDWIFGTD KGYRRLKTLK ENGDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,plastid]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.