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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G22756.1 Thale cress plasma membrane 88.25 87.96
CDX97357 Canola cytosol 81.88 87.14
CDY04397 Canola cytosol, plasma membrane, plastid 85.57 85.57
CDY71421 Canola endoplasmic reticulum, extracellular, plasma membrane 50.0 81.87
PGSC0003DMT400010023 Potato endoplasmic reticulum 54.03 75.59
CDX82968 Canola plasma membrane 94.63 75.0
CDY41295 Canola cytosol 64.09 74.03
Solyc08g079570.2.1 Tomato cytosol 72.48 72.97
GSMUA_Achr11P... Banana plasma membrane 68.79 67.66
GSMUA_Achr5P19760_001 Banana plasma membrane 68.12 67.0
Os10t0545200-01 Rice cytosol, plasma membrane, plastid 66.78 66.11
HORVU1Hr1G052890.1 Barley plasma membrane 66.78 66.11
TraesCS1B01G219200.2 Wheat plasma membrane 66.44 66.0
TraesCS1A01G205700.1 Wheat plasma membrane 66.44 65.78
TraesCS1D01G208900.1 Wheat plasma membrane 66.44 65.78
GSMUA_Achr8P19400_001 Banana plastid 52.68 65.69
EER94557 Sorghum cytosol 65.44 64.78
HORVU4Hr1G018180.1 Barley cytosol, golgi, plastid 37.25 63.07
Bra013643.1-P Field mustard cytosol 91.28 61.26
GSMUA_Achr5P18800_001 Banana cytosol, peroxisome, plasma membrane 60.74 60.33
KRH40602 Soybean cytosol, endoplasmic reticulum, plasma membrane 57.38 58.36
TraesCS4B01G332500.1 Wheat plasma membrane 56.04 57.59
HORVU4Hr1G080880.2 Barley plasma membrane 55.7 56.85
TraesCS4D01G329200.1 Wheat plasma membrane 55.03 56.55
HORVU7Hr1G000980.3 Barley plasma membrane 54.36 56.45
TraesCS5A01G503600.2 Wheat cytosol, endoplasmic reticulum, plasma membrane 55.7 55.52
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 56.71 55.41
HORVU1Hr1G001170.1 Barley cytosol 52.35 55.12
Os03t0108500-01 Rice cytosol 55.37 55.0
TraesCS4B01G097200.1 Wheat cytosol, golgi, plasma membrane 55.37 54.82
TraesCS4A01G218400.1 Wheat cytosol, golgi, plasma membrane 54.7 54.15
TraesCS1D01G007100.1 Wheat cytosol, plasma membrane, plastid 53.69 53.87
TraesCS4D01G093600.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 54.36 53.82
HORVU4Hr1G018150.1 Barley cytosol, golgi, plasma membrane 53.69 53.16
TraesCS5D01G422900.1 Wheat plasma membrane 51.68 53.1
TraesCS5A01G414500.1 Wheat plasma membrane 51.01 52.41
OQU80062 Sorghum plasma membrane 53.02 52.32
TraesCS7A01G013400.1 Wheat plasma membrane 52.35 52.0
TraesCS1D01G008900.1 Wheat plasma membrane 52.01 51.84
TraesCSU01G085800.1 Wheat cytosol, plasma membrane, plastid 51.34 51.17
Zm00001d040979_P001 Maize cytosol, plasma membrane, plastid 35.91 49.08
OQU86919 Sorghum golgi, peroxisome, plasma membrane 48.32 48.81
Zm00001d041458_P001 Maize plasma membrane 47.99 48.81
OQU77931 Sorghum cytosol, endoplasmic reticulum, plasma membrane 37.25 48.68
OQU79557 Sorghum golgi, peroxisome, plasma membrane 48.66 48.17
Zm00001d029810_P001 Maize mitochondrion 65.1 47.32
OQU79560 Sorghum endoplasmic reticulum, plasma membrane, plastid 44.63 45.55
CDY06258 Canola cytosol 3.36 45.45
HORVU4Hr1G090810.1 Barley cytosol 55.37 43.31
CDX94121 Canola cytosol 35.23 42.51
CDY09918 Canola cytosol, plasma membrane 35.23 40.23
CDY68059 Canola cytosol, plasma membrane 35.91 40.23
CDY51371 Canola cytosol 34.56 39.62
CDY06704 Canola endoplasmic reticulum, plasma membrane 35.91 38.77
CDY06257 Canola cytosol, plastid 23.83 35.68
CDX97889 Canola golgi, plasma membrane 33.89 31.96
CDX86488 Canola cytosol 36.91 22.18
CDY10274 Canola cytosol 36.58 19.85
Protein Annotations
MapMan:5.5.2.1GO:A0A078HVA5UniProt:A0A078HVA5EnsemblPlants:CDY41294ProteinID:CDY41294ProteinID:CDY41294.1
InterPro:Fatty_acid_hydroxylaseGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008610GO:GO:0009058GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00072723001PFAM:PF04116PANTHER:PTHR11863
PANTHER:PTHR11863:SF67TMHMM:TMhelixUniParc:UPI0004EEC050:::
Description
BnaA01g12450DBnaA01g12450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVA5]
Coordinates
chrLK032494:+:276761..278820
Molecular Weight (calculated)
34685.7 Da
IEP (calculated)
7.002
GRAVY (calculated)
-0.012
Length
298 amino acids
Sequence
(BLAST)
001: MIPYATIEEA SLALGRNLTT LESLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFVE LARSASGWFD RYKIQPKVKN SFSDMFRCYR DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSFGEIAA QLVVYFLVED YTNYWVHRFF HSKWGYEKIH HIHHEYTAPI GYAAPYAHWA EVLLLGVPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWTLTKF IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ IKQESKKSNM QDGGDKLD
Best Arabidopsis Sequence Match ( AT4G22756.1 )
(BLAST)
001: MIPYATIEEA SIALSRNLTW LETLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFIE SSQSTSDLFN RYKIQPKVKN SFSSMFKCYK DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSCMEIVA QLVVYFLVED YTNYWVHRFF HCKWGYEKFH HIHHEYTAPI GYAAPYAHWA EVLLLGIPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWSLTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ MKEKSKKSNK LVNGGEKFD
Arabidopsis Description
SMO1-2Methylsterol monooxygenase 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q1EC69]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.