Factsheet for GSMUA_Achr11P22580_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
endoplasmic reticulum 2
vacuole 2
extracellular 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum, vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18800_001	Banana	cytosol, peroxisome, plasma membrane	75.08	76.33
GSMUA_Achr8P19400_001	Banana	plastid	56.39	71.97
CDY71421	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.36	64.29
GSMUA_Achr5P19760_001	Banana	plasma membrane	60.98	61.39
GSMUA_Achr11P...	Banana	plasma membrane	60.0	60.4
KRH57309	Soybean	endoplasmic reticulum	58.69	60.27
PGSC0003DMT400010023	Potato	endoplasmic reticulum	41.97	60.09
Solyc01g091320.2.1	Tomato	cytosol	59.02	60.0
KRH04041	Soybean	endoplasmic reticulum	42.62	59.63
PGSC0003DMT400033236	Potato	cytosol	58.03	59.0
KRH40602	Soybean	cytosol, endoplasmic reticulum, plasma membrane	55.41	57.68
CDX97357	Canola	cytosol	52.79	57.5
AT4G22756.1	Thale cress	plasma membrane	55.74	56.86
AT4G12110.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	55.41	56.71
CDY41294	Canola	cytosol	55.41	56.71
AT4G22755.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	54.1	56.7
Solyc08g079570.2.1	Tomato	cytosol	54.75	56.42
VIT_00s2125g00010.t01	Wine grape	cytosol	40.66	56.11
CDY04397	Canola	cytosol, plasma membrane, plastid	54.75	56.04
Bra033117.1-P	Field mustard	cytosol	54.75	56.04
CDY41295	Canola	cytosol	47.21	55.81
KRH57571	Soybean	plastid	17.38	47.32
CDX82968	Canola	plasma membrane	55.74	45.21
Bra013643.1-P	Field mustard	cytosol	55.08	37.84
GSMUA_Achr6P04970_001	Banana	extracellular, plasma membrane	30.49	35.23
GSMUA_Achr7P10640_001	Banana	extracellular, plasma membrane	30.49	35.09
GSMUA_Achr9P03480_001	Banana	endoplasmic reticulum, plasma membrane	30.49	34.83
GSMUA_Achr10P...	Banana	cytosol	32.13	32.13
CDX94121	Canola	cytosol	25.57	31.58

Protein Annotations

MapMan:5.5.2.1	InterPro:Fatty_acid_hydroxylase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G22580_001	EnsemblPlants:GSMUA_Achr11P22580_001
EnsemblPlants:GSMUA_Achr11T22580_001	UniProt:M0RUI8	PFAM:PF04116	PANTHER:PTHR11863	PANTHER:PTHR11863:SF67	TMHMM:TMhelix
UniParc:UPI0002961922	:	:	:	:	:

Description

Putative C-4 methylsterol oxidase DDB_G0269788 [Source:GMGC_GENE;Acc:GSMUA_Achr11G22580_001]

Coordinates

chr11:+:22842287..22843623

Molecular Weight (calculated)

35494.0 Da

IEP (calculated)

8.600

GRAVY (calculated)

0.173

Length

305 amino acids

Sequence
(BLAST)

001: MLPFASTGDA EVAMGRDLTA VETAWFRYST GMSDFWLYAH NVVFLLLVYT LAPLPFVMAE LKRPKAIQKY KLQPNVHFPV ATFVKCYKNV VKTFIVAVGP
101: LQLLSYPTIK WVGIRTGLPL PSVWEVVAQL AVYFLVEDYF SYWLHRALHC RWGYQHIHRI HHEFSAPMAF AAPYAHWAEV LILGFPAFLG PALVPCHILT
201: LWLWFVLRHV EAIETHCGYD FPQTPTKYIP FYVGAEYHDY HHYVGEKSHS NFASVFTYCD YIYGTDKGFR YQKTQLAKVF YIFFYPHIYT SLHITAKRST
301: ENTVY

Best Arabidopsis Sequence Match ( AT4G12110.1 )
(BLAST)

001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD

Arabidopsis Description

SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.