Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41294 Canola cytosol 75.0 94.63
AT4G22756.1 Thale cress plasma membrane 68.62 86.29
CDX97357 Canola cytosol 62.77 84.29
CDY04397 Canola cytosol, plasma membrane, plastid 65.43 82.55
CDY71421 Canola endoplasmic reticulum, extracellular, plasma membrane 38.56 79.67
PGSC0003DMT400010023 Potato endoplasmic reticulum 42.55 75.12
CDY41295 Canola cytosol 50.8 74.03
Solyc08g079570.2.1 Tomato cytosol 56.38 71.62
GSMUA_Achr5P19760_001 Banana plasma membrane 54.52 67.66
GSMUA_Achr11P... Banana plasma membrane 54.52 67.66
TraesCS1B01G219200.2 Wheat plasma membrane 51.6 64.67
HORVU1Hr1G052890.1 Barley plasma membrane 51.6 64.45
Os10t0545200-01 Rice cytosol, plasma membrane, plastid 51.6 64.45
TraesCS1A01G205700.1 Wheat plasma membrane 51.6 64.45
TraesCS1D01G208900.1 Wheat plasma membrane 51.6 64.45
GSMUA_Achr8P19400_001 Banana plastid 40.69 64.02
EER94557 Sorghum cytosol 50.8 63.46
HORVU4Hr1G018180.1 Barley cytosol, golgi, plastid 29.52 63.07
Bra013643.1-P Field mustard cytosol 72.87 61.71
GSMUA_Achr5P18800_001 Banana cytosol, peroxisome, plasma membrane 47.61 59.67
KRH40602 Soybean cytosol, endoplasmic reticulum, plasma membrane 45.48 58.36
TraesCS4B01G332500.1 Wheat plasma membrane 44.15 57.24
HORVU4Hr1G080880.2 Barley plasma membrane 44.41 57.19
TraesCS4D01G329200.1 Wheat plasma membrane 43.35 56.21
HORVU7Hr1G000980.3 Barley plasma membrane 42.82 56.1
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 45.21 55.74
TraesCS5A01G503600.2 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.88 55.18
HORVU1Hr1G001170.1 Barley cytosol 41.49 55.12
Os03t0108500-01 Rice cytosol 43.09 54.0
TraesCS4B01G097200.1 Wheat cytosol, golgi, plasma membrane 43.09 53.82
TraesCS5D01G422900.1 Wheat plasma membrane 41.22 53.45
TraesCS1D01G007100.1 Wheat cytosol, plasma membrane, plastid 42.02 53.2
HORVU4Hr1G018150.1 Barley cytosol, golgi, plasma membrane 42.55 53.16
TraesCS4A01G218400.1 Wheat cytosol, golgi, plasma membrane 42.55 53.16
TraesCS5A01G414500.1 Wheat plasma membrane 40.96 53.1
TraesCS4D01G093600.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 42.29 52.82
OQU80062 Sorghum plasma membrane 41.49 51.66
TraesCS7A01G013400.1 Wheat plasma membrane 40.96 51.33
TraesCS1D01G008900.1 Wheat plasma membrane 40.69 51.17
TraesCSU01G085800.1 Wheat cytosol, plasma membrane, plastid 40.16 50.5
OQU86919 Sorghum golgi, peroxisome, plasma membrane 38.3 48.81
OQU77931 Sorghum cytosol, endoplasmic reticulum, plasma membrane 29.52 48.68
Zm00001d040979_P001 Maize cytosol, plasma membrane, plastid 28.19 48.62
Zm00001d041458_P001 Maize plasma membrane 37.23 47.78
OQU79557 Sorghum golgi, peroxisome, plasma membrane 37.77 47.18
Zm00001d029810_P001 Maize mitochondrion 50.53 46.34
CDY06258 Canola cytosol 2.66 45.45
OQU79560 Sorghum endoplasmic reticulum, plasma membrane, plastid 34.57 44.52
HORVU4Hr1G090810.1 Barley cytosol 43.35 42.78
CDY09918 Canola cytosol, plasma membrane 27.93 40.23
CDY68059 Canola cytosol, plasma membrane 28.46 40.23
CDY51371 Canola cytosol 27.39 39.62
CDX94121 Canola cytosol 25.53 38.87
CDY06704 Canola endoplasmic reticulum, plasma membrane 28.46 38.77
CDY06257 Canola cytosol, plastid 18.88 35.68
CDX97889 Canola golgi, plasma membrane 26.86 31.96
CDX86488 Canola cytosol 29.26 22.18
CDY10274 Canola cytosol 28.99 19.85
Protein Annotations
MapMan:5.5.2.1GO:A0A078D6W3EnsemblPlants:CDX82968ProteinID:CDX82968ProteinID:CDX82968.1InterPro:Fatty_acid_hydroxylase
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0008610GO:GO:0009058GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00138384001
PFAM:PF04116PANTHER:PTHR11863PANTHER:PTHR11863:SF67TMHMM:TMhelixUniParc:UPI0004EDDC0ESEG:seg
Description
BnaC01g14180D
Coordinates
chrLK031830:-:1832610..1835293
Molecular Weight (calculated)
42721.8 Da
IEP (calculated)
8.139
GRAVY (calculated)
0.151
Length
376 amino acids
Sequence
(BLAST)
001: MIPYATIEDA SLALGRNLTT LESLWFDYSA AKSDYYLYCH NILFLFLIFS LVPLPLVFVE LARSASGWFD RYKIQPKVKN SFSDMFRCYR DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSFGEIAA QLVVYFLVED YTNYWVHRFF HSKWGYEKIH HIHHEYTAPI GYAAPYAHWA EVLLLGVPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWTLTKF IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ IKQESKKSNM QNGGDNSSLC
301: SLVLLCGGGG NLPEVLRFRS GASMVKSVGL RTARSSSCRL LVVLSISCRY FCGCVAEMEL LGSGGVGKVQ VWLPAF
Best Arabidopsis Sequence Match ( AT4G12110.1 )
(BLAST)
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.