Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY41294 | Canola | cytosol | 75.0 | 94.63 |
AT4G22756.1 | Thale cress | plasma membrane | 68.62 | 86.29 |
CDX97357 | Canola | cytosol | 62.77 | 84.29 |
CDY04397 | Canola | cytosol, plasma membrane, plastid | 65.43 | 82.55 |
CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 38.56 | 79.67 |
PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 42.55 | 75.12 |
CDY41295 | Canola | cytosol | 50.8 | 74.03 |
Solyc08g079570.2.1 | Tomato | cytosol | 56.38 | 71.62 |
GSMUA_Achr5P19760_001 | Banana | plasma membrane | 54.52 | 67.66 |
GSMUA_Achr11P... | Banana | plasma membrane | 54.52 | 67.66 |
TraesCS1B01G219200.2 | Wheat | plasma membrane | 51.6 | 64.67 |
HORVU1Hr1G052890.1 | Barley | plasma membrane | 51.6 | 64.45 |
Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 51.6 | 64.45 |
TraesCS1A01G205700.1 | Wheat | plasma membrane | 51.6 | 64.45 |
TraesCS1D01G208900.1 | Wheat | plasma membrane | 51.6 | 64.45 |
GSMUA_Achr8P19400_001 | Banana | plastid | 40.69 | 64.02 |
EER94557 | Sorghum | cytosol | 50.8 | 63.46 |
HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 29.52 | 63.07 |
Bra013643.1-P | Field mustard | cytosol | 72.87 | 61.71 |
GSMUA_Achr5P18800_001 | Banana | cytosol, peroxisome, plasma membrane | 47.61 | 59.67 |
KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 45.48 | 58.36 |
TraesCS4B01G332500.1 | Wheat | plasma membrane | 44.15 | 57.24 |
HORVU4Hr1G080880.2 | Barley | plasma membrane | 44.41 | 57.19 |
TraesCS4D01G329200.1 | Wheat | plasma membrane | 43.35 | 56.21 |
HORVU7Hr1G000980.3 | Barley | plasma membrane | 42.82 | 56.1 |
GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 45.21 | 55.74 |
TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 43.88 | 55.18 |
HORVU1Hr1G001170.1 | Barley | cytosol | 41.49 | 55.12 |
Os03t0108500-01 | Rice | cytosol | 43.09 | 54.0 |
TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 43.09 | 53.82 |
TraesCS5D01G422900.1 | Wheat | plasma membrane | 41.22 | 53.45 |
TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 42.02 | 53.2 |
HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 42.55 | 53.16 |
TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 42.55 | 53.16 |
TraesCS5A01G414500.1 | Wheat | plasma membrane | 40.96 | 53.1 |
TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 42.29 | 52.82 |
OQU80062 | Sorghum | plasma membrane | 41.49 | 51.66 |
TraesCS7A01G013400.1 | Wheat | plasma membrane | 40.96 | 51.33 |
TraesCS1D01G008900.1 | Wheat | plasma membrane | 40.69 | 51.17 |
TraesCSU01G085800.1 | Wheat | cytosol, plasma membrane, plastid | 40.16 | 50.5 |
OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 38.3 | 48.81 |
OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 29.52 | 48.68 |
Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 28.19 | 48.62 |
Zm00001d041458_P001 | Maize | plasma membrane | 37.23 | 47.78 |
OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 37.77 | 47.18 |
Zm00001d029810_P001 | Maize | mitochondrion | 50.53 | 46.34 |
CDY06258 | Canola | cytosol | 2.66 | 45.45 |
OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 34.57 | 44.52 |
HORVU4Hr1G090810.1 | Barley | cytosol | 43.35 | 42.78 |
CDY09918 | Canola | cytosol, plasma membrane | 27.93 | 40.23 |
CDY68059 | Canola | cytosol, plasma membrane | 28.46 | 40.23 |
CDY51371 | Canola | cytosol | 27.39 | 39.62 |
CDX94121 | Canola | cytosol | 25.53 | 38.87 |
CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 28.46 | 38.77 |
CDY06257 | Canola | cytosol, plastid | 18.88 | 35.68 |
CDX97889 | Canola | golgi, plasma membrane | 26.86 | 31.96 |
CDX86488 | Canola | cytosol | 29.26 | 22.18 |
CDY10274 | Canola | cytosol | 28.99 | 19.85 |
Protein Annotations
MapMan:5.5.2.1 | GO:A0A078D6W3 | EnsemblPlants:CDX82968 | ProteinID:CDX82968 | ProteinID:CDX82968.1 | InterPro:Fatty_acid_hydroxylase |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0006629 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00138384001 |
PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF67 | TMHMM:TMhelix | UniParc:UPI0004EDDC0E | SEG:seg |
Description
BnaC01g14180D
Coordinates
chrLK031830:-:1832610..1835293
Molecular Weight (calculated)
42721.8 Da
IEP (calculated)
8.139
GRAVY (calculated)
0.151
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPYATIEDA SLALGRNLTT LESLWFDYSA AKSDYYLYCH NILFLFLIFS LVPLPLVFVE LARSASGWFD RYKIQPKVKN SFSDMFRCYR DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSFGEIAA QLVVYFLVED YTNYWVHRFF HSKWGYEKIH HIHHEYTAPI GYAAPYAHWA EVLLLGVPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWTLTKF IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ IKQESKKSNM QNGGDNSSLC
301: SLVLLCGGGG NLPEVLRFRS GASMVKSVGL RTARSSSCRL LVVLSISCRY FCGCVAEMEL LGSGGVGKVQ VWLPAF
101: GPLQLVSYPS IQMIEIRSGL PLPSFGEIAA QLVVYFLVED YTNYWVHRFF HSKWGYEKIH HIHHEYTAPI GYAAPYAHWA EVLLLGVPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWTLTKF IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ IKQESKKSNM QNGGDNSSLC
301: SLVLLCGGGG NLPEVLRFRS GASMVKSVGL RTARSSSCRL LVVLSISCRY FCGCVAEMEL LGSGGVGKVQ VWLPAF
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.