Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 69.49 | 94.04 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 37.63 | 63.07 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.59 | 57.69 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 58.31 | 57.14 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 58.31 | 57.14 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 58.31 | 57.14 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 58.31 | 57.14 |
| OQU80062 | Sorghum | plasma membrane | 56.61 | 55.3 |
| EER94557 | Sorghum | cytosol | 56.27 | 55.15 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 56.27 | 54.79 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 41.69 | 53.95 |
| GSMUA_Achr11P... | Banana | plasma membrane | 53.9 | 52.48 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 52.54 | 51.49 |
| KRH04041 | Soybean | endoplasmic reticulum | 37.63 | 50.92 |
| KRH57309 | Soybean | endoplasmic reticulum | 51.19 | 50.84 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 36.27 | 50.23 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 49.15 | 49.66 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 36.61 | 48.87 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 49.15 | 48.66 |
| AT4G22756.1 | Thale cress | plasma membrane | 49.15 | 48.49 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 47.8 | 48.45 |
| CDY41294 | Canola | cytosol | 48.81 | 48.32 |
| Bra033117.1-P | Field mustard | cytosol | 48.81 | 48.32 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 47.8 | 48.12 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 48.47 | 47.99 |
| Solyc08g079570.2.1 | Tomato | cytosol | 48.14 | 47.97 |
| CDX97357 | Canola | cytosol | 45.42 | 47.86 |
| CDY41295 | Canola | cytosol | 41.69 | 47.67 |
| Solyc01g091320.2.1 | Tomato | cytosol | 46.78 | 46.0 |
| PGSC0003DMT400033236 | Potato | cytosol | 45.76 | 45.0 |
| KRH57571 | Soybean | plastid | 14.58 | 38.39 |
| CDX82968 | Canola | plasma membrane | 48.81 | 38.3 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 30.51 | 33.58 |
| Bra013643.1-P | Field mustard | cytosol | 48.47 | 32.21 |
| CDX94121 | Canola | cytosol | 22.71 | 27.13 |
Protein Annotations
| MapMan:5.5.2.1 | EntrezGene:8069599 | UniProt:A0A1W0VXR1 | ncoils:Coil | InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlants:OQU86919 | ProteinID:OQU86919 | ProteinID:OQU86919.1 | PFAM:PF04116 | PANTHER:PTHR11863 |
| PANTHER:PTHR11863:SF51 | EnsemblPlantsGene:SORBI_3003G173700 | TMHMM:TMhelix | UniParc:UPI0009DC8303 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:40407298..40409924
Molecular Weight (calculated)
33721.8 Da
IEP (calculated)
8.027
GRAVY (calculated)
0.091
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPYATAAEA EAALGRAMTW AEAAWYQYSA VMPDSWLHCH TTFILFVIYT IAPLPLLVLE QFAPSVVLPY KLQPRVRLPP AASLSCYMDA ACIFPLAVAL
101: QFVCYPALAK ILRTRMGLPL PSVRETIAQI VVYSLVEDYL SYWIHRLLHT EWCYRKIHRV HHEFTAPTGF AMSYSHWAEN VVLSIPALAG PVLVPCHVTT
201: QWLWFSIRLI EGINTHSGYH FPFSPSRLIP FYGGAAYHDY HHYAGGRSQS NFAPLFTYCD YIYRTDKGYR YHKLKQEKEQ LKNLAECSAE KGGDY
101: QFVCYPALAK ILRTRMGLPL PSVRETIAQI VVYSLVEDYL SYWIHRLLHT EWCYRKIHRV HHEFTAPTGF AMSYSHWAEN VVLSIPALAG PVLVPCHVTT
201: QWLWFSIRLI EGINTHSGYH FPFSPSRLIP FYGGAAYHDY HHYAGGRSQS NFAPLFTYCD YIYRTDKGYR YHKLKQEKEQ LKNLAECSAE KGGDY
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.