Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- endoplasmic reticulum 2
- vacuole 2
- extracellular 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g091320.2.1 | Tomato | cytosol | 96.67 | 96.67 |
| GSMUA_Achr8P19400_001 | Banana | plastid | 52.33 | 65.69 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 44.0 | 61.97 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 59.0 | 60.41 |
| GSMUA_Achr5P18800_001 | Banana | cytosol, peroxisome, plasma membrane | 59.0 | 59.0 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 59.0 | 58.03 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 58.0 | 57.43 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 33.67 | 57.39 |
| GSMUA_Achr11P... | Banana | plasma membrane | 57.0 | 56.44 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 55.0 | 54.82 |
| TraesCS1B01G219200.2 | Wheat | plasma membrane | 54.67 | 54.67 |
| EER94557 | Sorghum | cytosol | 54.67 | 54.49 |
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 54.33 | 54.15 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 54.0 | 53.82 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 54.0 | 53.82 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 50.67 | 52.05 |
| TraesCS4B01G332500.1 | Wheat | plasma membrane | 50.0 | 51.72 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 49.33 | 51.03 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 48.0 | 50.88 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 48.67 | 50.87 |
| Os03t0108500-01 | Rice | cytosol | 50.67 | 50.67 |
| TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 50.0 | 50.51 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 50.0 | 50.17 |
| TraesCS1D01G008900.1 | Wheat | plasma membrane | 49.33 | 49.5 |
| TraesCSU01G085800.1 | Wheat | cytosol, plasma membrane, plastid | 49.0 | 49.16 |
| TraesCS5D01G422900.1 | Wheat | plasma membrane | 46.0 | 47.59 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 47.67 | 47.51 |
| TraesCS5A01G414500.1 | Wheat | plasma membrane | 45.67 | 47.24 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 47.33 | 47.18 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 47.0 | 46.84 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 46.67 | 46.51 |
| TraesCS7A01G013400.1 | Wheat | plasma membrane | 46.33 | 46.33 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 35.0 | 46.05 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 45.0 | 45.76 |
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 32.67 | 44.95 |
| OQU80062 | Sorghum | plasma membrane | 45.0 | 44.7 |
| Zm00001d041458_P001 | Maize | plasma membrane | 43.33 | 44.37 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 42.0 | 41.86 |
| Zm00001d029810_P001 | Maize | mitochondrion | 55.0 | 40.24 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 38.67 | 39.73 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 48.67 | 38.32 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 33.33 | 37.59 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 33.33 | 37.17 |
Protein Annotations
| EntrezGene:102606141 | MapMan:5.5.2.1 | InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | UniProt:M1AYT4 |
| PFAM:PF04116 | EnsemblPlantsGene:PGSC0003DMG400012763 | PGSC:PGSC0003DMG400012763 | EnsemblPlants:PGSC0003DMT400033236 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF67 |
| TMHMM:TMhelix | UniParc:UPI000294E133 | RefSeq:XP_006339428.1 | SEG:seg | : | : |
Description
C-4 sterol methyl oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400012763]
Coordinates
chr1:-:70705183..70708003
Molecular Weight (calculated)
35465.0 Da
IEP (calculated)
6.748
GRAVY (calculated)
0.085
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPFESIEEA SMSLGRNLTF GETLWFNYTA DKSDFYLYCH NTIFLIIFYS LVPLPMVMIE LLRSKKFEIY KIQPKTTLTL SEMMECYRKV LMTFVFAVGP
101: LQLFSYPIIE WVGIRTSLPL PSASEVFWQL VVYFVVEDYA NYWLHRMLHH YKWGYDKIHS VHHEYVAPIS FAAPYAHWAE IIILGLASFL GPLLVPCHMF
201: TFLLWFVLRQ IEAIETHSGY EFPWSPSKYI PFYGGAIYHD YHHFVGESCH SNFASVFTYC DYIYGTDKGF RYQKEVFEKR REKLRMEEKV NGSAPLFKSE
101: LQLFSYPIIE WVGIRTSLPL PSASEVFWQL VVYFVVEDYA NYWLHRMLHH YKWGYDKIHS VHHEYVAPIS FAAPYAHWAE IIILGLASFL GPLLVPCHMF
201: TFLLWFVLRQ IEAIETHSGY EFPWSPSKYI PFYGGAIYHD YHHFVGESCH SNFASVFTYC DYIYGTDKGF RYQKEVFEKR REKLRMEEKV NGSAPLFKSE
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.