Factsheet for HORVU4Hr1G080880.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G332500.1	Wheat	plasma membrane	90.75	91.38
TraesCS4D01G329200.1	Wheat	plasma membrane	88.36	88.97
TraesCS5A01G503600.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane	89.73	87.63
Os03t0108500-01	Rice	cytosol	74.32	72.33
HORVU7Hr1G000980.3	Barley	plasma membrane	69.18	70.38
HORVU1Hr1G001170.1	Barley	cytosol	67.81	69.96
HORVU4Hr1G018180.1	Barley	cytosol, golgi, plastid	42.12	69.89
HORVU1Hr1G052890.1	Barley	plasma membrane	67.12	65.12
HORVU4Hr1G090810.1	Barley	cytosol	83.9	64.3
HORVU4Hr1G018150.1	Barley	cytosol, golgi, plasma membrane	64.73	62.79
GSMUA_Achr5P19760_001	Banana	plasma membrane	65.07	62.71
CDY71421	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.7	62.09
GSMUA_Achr11P...	Banana	plasma membrane	63.7	61.39
OQU77931	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	47.6	60.96
KRH04041	Soybean	endoplasmic reticulum	43.49	58.26
PGSC0003DMT400010023	Potato	endoplasmic reticulum	42.12	57.75
KRH57309	Soybean	endoplasmic reticulum	57.88	56.9
CDY41294	Canola	cytosol	56.85	55.7
AT4G12110.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	56.16	55.03
CDX97357	Canola	cytosol	52.74	55.0
Bra033117.1-P	Field mustard	cytosol	55.48	54.36
Solyc08g079570.2.1	Tomato	cytosol	54.79	54.05
CDY04397	Canola	cytosol, plasma membrane, plastid	55.14	54.03
VIT_00s2125g00010.t01	Wine grape	cytosol	40.75	53.85
AT4G22755.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	53.42	53.61
AT4G22756.1	Thale cress	plasma membrane	54.45	53.18
CDY41295	Canola	cytosol	45.89	51.94
Solyc01g091320.2.1	Tomato	cytosol	52.74	51.33
KRH40602	Soybean	cytosol, endoplasmic reticulum, plasma membrane	51.37	51.19
PGSC0003DMT400033236	Potato	cytosol	52.05	50.67
KRH57571	Soybean	plastid	17.12	44.64
CDX82968	Canola	plasma membrane	57.19	44.41
Bra013643.1-P	Field mustard	cytosol	57.53	37.84
CDX94121	Canola	cytosol	25.34	29.96

Protein Annotations

MapMan:5.5.2.1	UniProt:A0A287PU66	InterPro:Fatty_acid_hydroxylase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610
GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU4Hr1G080880
EnsemblPlants:HORVU4Hr1G080880.2	PFAM:PF04116	PANTHER:PTHR11863	PANTHER:PTHR11863:SF51	TMHMM:TMhelix	UniParc:UPI000B46A519
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:617658319..617659479

Molecular Weight (calculated)

32979.2 Da

IEP (calculated)

8.833

GRAVY (calculated)

0.172

Length

292 amino acids

Sequence
(BLAST)

001: MLPYATAAQA EAALGRAMTR AEAAWLRYSA SLPDHLLYCH NVAILLLVYT LAPLPLALLE LRARAAAVMR PSMYKLQPRA QLSPGEFLRC YLQTGRVLLL
101: TVGTLSLVSY PAVKMAGIRT GLPLPSAGEV AAQMLVYLLV EDYLGYWIHR LLHTRWGYDH IHHVHHEFTA PFGYAAPYAH WAEVLILGVP AFTGPAIVPC
201: HMTTLWLWFV LRHLEAIDIH SGFKFPFNPT KLIPFYGGAE HHDYHHRVGG QSQSNFSSVF TFCDYLYGTD KGYRYHKASL EKVRCHFLHH LS

Best Arabidopsis Sequence Match ( AT1G07420.1 )
(BLAST)

001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT

Arabidopsis Description

SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.