Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 64.3 | 83.9 |
| Os03t0108500-01 | Rice | cytosol | 56.69 | 72.0 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 51.97 | 68.99 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 50.13 | 67.49 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 30.97 | 67.05 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 50.13 | 63.46 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.13 | 60.99 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 48.29 | 60.73 |
| GSMUA_Achr11P... | Banana | plasma membrane | 48.03 | 60.4 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 46.98 | 59.47 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 34.91 | 58.33 |
| KRH04041 | Soybean | endoplasmic reticulum | 32.81 | 57.34 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 32.81 | 56.56 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 31.23 | 55.87 |
| CDY41294 | Canola | cytosol | 43.31 | 55.37 |
| KRH57309 | Soybean | endoplasmic reticulum | 43.04 | 55.22 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 42.52 | 54.36 |
| CDX97357 | Canola | cytosol | 39.9 | 54.29 |
| Bra033117.1-P | Field mustard | cytosol | 42.26 | 54.03 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 41.99 | 53.69 |
| Solyc08g079570.2.1 | Tomato | cytosol | 41.21 | 53.04 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 40.42 | 52.92 |
| AT4G22756.1 | Thale cress | plasma membrane | 41.47 | 52.84 |
| CDY41295 | Canola | cytosol | 34.91 | 51.55 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 39.37 | 51.19 |
| Solyc01g091320.2.1 | Tomato | cytosol | 39.11 | 49.67 |
| PGSC0003DMT400033236 | Potato | cytosol | 38.32 | 48.67 |
| CDX82968 | Canola | plasma membrane | 42.78 | 43.35 |
| KRH57571 | Soybean | plastid | 12.6 | 42.86 |
| Bra013643.1-P | Field mustard | cytosol | 43.31 | 37.16 |
| CDX94121 | Canola | cytosol | 19.95 | 30.77 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G090810.1 | EnsemblPlantsGene:HORVU4Hr1G090810 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:Fatty_acid_hydroxylase | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF51 | PFAM:PF04116 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000B46B7F1 | UniProt:A0A287Q4Y3 | MapMan:5.5.2.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:646093879..646096577
Molecular Weight (calculated)
42705.7 Da
IEP (calculated)
8.808
GRAVY (calculated)
-0.061
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: ASTCMHDKAN EHSPMSPSSY SISTCSCCPP YDHFYCRHLA HRRRGRAPSP HMAWCPPDMH RPAPVTKSQS MEHKYVELPK KRHLNKSERA ILFQMLPYAT
101: AAEAEAGLGR ALTHAEAAWL GYSATVPDHL LYCHNVAILL LLYTIAPLPL ALLELRARRA GPGEPLFSLQ RLKLQPRACL SPAAILRCYL DTARVLLLTV
201: GTLSLVSYPA VRAVGIRTGL PLPSPGEVAA QIAVYLLVED YLGYWIHRLL HTRWGYDHIH RVHHEFTAPV GYAAPYAHWA EVLILGVPAF TGPAIVPCHM
301: TTLWLWFVLR HLEAIDIHSG FNFPFNPTKL IPFYGGAEHH DYHHRVGGQS QSNFSSVFTF CDYLYGTDKG YKHHKASLAK S
101: AAEAEAGLGR ALTHAEAAWL GYSATVPDHL LYCHNVAILL LLYTIAPLPL ALLELRARRA GPGEPLFSLQ RLKLQPRACL SPAAILRCYL DTARVLLLTV
201: GTLSLVSYPA VRAVGIRTGL PLPSPGEVAA QIAVYLLVED YLGYWIHRLL HTRWGYDHIH RVHHEFTAPV GYAAPYAHWA EVLILGVPAF TGPAIVPCHM
301: TTLWLWFVLR HLEAIDIHSG FNFPFNPTKL IPFYGGAEHH DYHHRVGGQS QSNFSSVFTF CDYLYGTDKG YKHHKASLAK S
001: MLLLPFMVNT YFSFVPMQTK NNTPAAQGKC ITRLLLYHFS VNLPLMLASY PVFRAMGMRS SFPLPSWKEV SAQILFYFII EDFVFYWGHR ILHSKWLYKN
101: VHSVHHEYAT PFGLTSEYAH PAEILFLGFA TIVGPALTGP HLITLWLWMV LRVLETVEAH CGYHFPWSLS NFLPLYGGAD FHDYHHRLLY TKSGNYSSTF
201: VYMDWIFGTD KGYRRLKTLK ENGDMKQT
101: VHSVHHEYAT PFGLTSEYAH PAEILFLGFA TIVGPALTGP HLITLWLWMV LRVLETVEAH CGYHFPWSLS NFLPLYGGAD FHDYHHRLLY TKSGNYSSTF
201: VYMDWIFGTD KGYRRLKTLK ENGDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,plastid]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.