Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • endoplasmic reticulum 2
  • vacuole 2
  • extracellular 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum, vacuole
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97357 Canola cytosol 90.94 96.79
CDY04397 Canola cytosol, plasma membrane, plastid 96.64 96.64
AT4G12110.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 91.95 91.95
PGSC0003DMT400010023 Potato endoplasmic reticulum 54.36 76.06
Solyc08g079570.2.1 Tomato cytosol 72.48 72.97
GSMUA_Achr5P19760_001 Banana plasma membrane 67.79 66.67
GSMUA_Achr11P... Banana plasma membrane 66.44 65.35
TraesCS1B01G219200.2 Wheat plasma membrane 65.44 65.0
TraesCS1D01G208900.1 Wheat plasma membrane 65.44 64.78
TraesCS1A01G205700.1 Wheat plasma membrane 65.44 64.78
HORVU1Hr1G052890.1 Barley plasma membrane 65.44 64.78
Os10t0545200-01 Rice cytosol, plasma membrane, plastid 65.44 64.78
GSMUA_Achr8P19400_001 Banana plastid 51.34 64.02
EER94557 Sorghum cytosol 64.43 63.79
GSMUA_Achr5P18800_001 Banana cytosol, peroxisome, plasma membrane 61.74 61.33
KRH40602 Soybean cytosol, endoplasmic reticulum, plasma membrane 60.07 61.09
HORVU4Hr1G018180.1 Barley cytosol, golgi, plastid 34.9 59.09
TraesCS4B01G332500.1 Wheat plasma membrane 54.7 56.21
Bra013643.1-P Field mustard cytosol 82.89 55.63
TraesCS4D01G329200.1 Wheat plasma membrane 54.03 55.52
HORVU4Hr1G080880.2 Barley plasma membrane 54.36 55.48
HORVU1Hr1G001170.1 Barley cytosol 52.68 55.48
HORVU7Hr1G000980.3 Barley plasma membrane 53.36 55.4
Os03t0108500-01 Rice cytosol 55.7 55.33
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 56.04 54.75
TraesCS5A01G503600.2 Wheat cytosol, endoplasmic reticulum, plasma membrane 54.36 54.18
TraesCS1D01G007100.1 Wheat cytosol, plasma membrane, plastid 53.69 53.87
TraesCS4B01G097200.1 Wheat cytosol, golgi, plasma membrane 53.69 53.16
TraesCS4D01G093600.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 53.02 52.49
TraesCS4A01G218400.1 Wheat cytosol, golgi, plasma membrane 53.02 52.49
TraesCS1D01G008900.1 Wheat plasma membrane 52.35 52.17
TraesCSU01G085800.1 Wheat cytosol, plasma membrane, plastid 52.01 51.84
HORVU4Hr1G018150.1 Barley cytosol, golgi, plasma membrane 52.35 51.83
TraesCS5D01G422900.1 Wheat plasma membrane 50.34 51.72
TraesCS5A01G414500.1 Wheat plasma membrane 49.66 51.03
TraesCS7A01G013400.1 Wheat plasma membrane 50.67 50.33
OQU80062 Sorghum plasma membrane 50.34 49.67
OQU86919 Sorghum golgi, peroxisome, plasma membrane 48.32 48.81
Zm00001d040979_P001 Maize cytosol, plasma membrane, plastid 35.23 48.17
Zm00001d029810_P001 Maize mitochondrion 65.44 47.56
Zm00001d041458_P001 Maize plasma membrane 46.31 47.1
OQU79557 Sorghum golgi, peroxisome, plasma membrane 47.32 46.84
OQU77931 Sorghum cytosol, endoplasmic reticulum, plasma membrane 35.57 46.49
OQU79560 Sorghum endoplasmic reticulum, plasma membrane, plastid 42.95 43.84
HORVU4Hr1G090810.1 Barley cytosol 54.03 42.26
Bra039978.1-P Field mustard endoplasmic reticulum, golgi 34.56 32.09
Bra030681.1-P Field mustard cytosol 37.25 21.47
Protein Annotations
MapMan:5.5.2.1EnsemblPlantsGene:Bra033117EnsemblPlants:Bra033117.1EnsemblPlants:Bra033117.1-PInterPro:Fatty_acid_hydroxylaseGO:GO:0000254
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0008610GO:GO:0009058GO:GO:0016020GO:GO:0016021
GO:GO:0016126GO:GO:0016491GO:GO:0055114UniProt:M4EWD3PFAM:PF04116PANTHER:PTHR11863
PANTHER:PTHR11863:SF67TMHMM:TMhelixUniParc:UPI00025471DF:::
Description
AT4G12110 (E=1e-169) SMO1-1, ATSMO1, ATSMO1-1 | SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic
Coordinates
chrA02:-:16623330..16625030
Molecular Weight (calculated)
34716.7 Da
IEP (calculated)
7.192
GRAVY (calculated)
-0.043
Length
298 amino acids
Sequence
(BLAST)
001: MIPYGTVEEA SFALGRNLTW LETVWFDYSA TKSDYYLYCH NILFLFLVFS LAPIPLVFVE LARSFSGWFD RYKIQPKVNY SLSDMFGCYK DVMKMFILVV
101: GPLQLVSYPS IQMIGIRSGL PLPTLSEMLP QLFVYFLIED YTNYWVHRFF HSKWGYENIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Best Arabidopsis Sequence Match ( AT4G12110.1 )
(BLAST)
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.