Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041458_P001 | Maize | plasma membrane | 80.48 | 80.2 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 77.4 | 75.08 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 32.53 | 53.98 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.22 | 53.3 |
| OQU80062 | Sorghum | plasma membrane | 53.08 | 51.32 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 49.66 | 49.15 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 50.34 | 48.84 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 50.34 | 48.84 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 50.0 | 48.51 |
| GSMUA_Achr11P... | Banana | plasma membrane | 50.0 | 48.18 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 49.66 | 48.17 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 49.66 | 47.85 |
| EER94557 | Sorghum | cytosol | 49.32 | 47.84 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 34.59 | 47.42 |
| KRH57309 | Soybean | endoplasmic reticulum | 46.58 | 45.79 |
| CDY41294 | Canola | cytosol | 45.55 | 44.63 |
| KRH04041 | Soybean | endoplasmic reticulum | 32.88 | 44.04 |
| Solyc08g079570.2.1 | Tomato | cytosol | 44.18 | 43.58 |
| AT4G22756.1 | Thale cress | plasma membrane | 44.18 | 43.14 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 33.56 | 42.98 |
| Bra033117.1-P | Field mustard | cytosol | 43.84 | 42.95 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 43.49 | 42.62 |
| CDX97357 | Canola | cytosol | 40.75 | 42.5 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 43.15 | 42.28 |
| CDY41295 | Canola | cytosol | 36.99 | 41.86 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 31.51 | 41.63 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 41.44 | 41.58 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 41.1 | 40.96 |
| Solyc01g091320.2.1 | Tomato | cytosol | 40.07 | 39.0 |
| PGSC0003DMT400033236 | Potato | cytosol | 39.73 | 38.67 |
| CDX82968 | Canola | plasma membrane | 44.52 | 34.57 |
| KRH57571 | Soybean | plastid | 12.67 | 33.04 |
| Bra013643.1-P | Field mustard | cytosol | 43.84 | 28.83 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 25.34 | 27.61 |
| CDX94121 | Canola | cytosol | 22.26 | 26.32 |
Protein Annotations
| MapMan:5.5.2.1 | UniProt:A0A1Z5R752 | InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlants:OQU79560 |
| ProteinID:OQU79560 | ProteinID:OQU79560.1 | PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF51 | EnsemblPlantsGene:SORBI_3008G162700 |
| TMHMM:TMhelix | UniParc:UPI000B426B28 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:59648277..59651477
Molecular Weight (calculated)
32942.9 Da
IEP (calculated)
9.526
GRAVY (calculated)
0.050
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPYGTAAGA EAALGRSMSW AEALWFRYSA AMPELWLTSH IALVYLVMYA VAPLPVMVLQ QLAPAYALRH KLQPGVPQPS PVSVYLSYIS ESKGLTLSVL
101: GPFPLIYSAA FKLFGVRTGL PLPSVWETAM HLVVYSLVED YLSYWLHRFL HTKWGYEKIH SAHHEKTAPS GFAGSYATGT DLTLYTITLF FGPAIVPSHV
201: TTHWLWFSIR IMEAFDAHCG LARFIPFFGG AEFHDYHHYA GKKTKSNFSS VFRYCDYIYG TNKGYMYHKR SLAKLKMKEV KHNMKGSSGK ED
101: GPFPLIYSAA FKLFGVRTGL PLPSVWETAM HLVVYSLVED YLSYWLHRFL HTKWGYEKIH SAHHEKTAPS GFAGSYATGT DLTLYTITLF FGPAIVPSHV
201: TTHWLWFSIR IMEAFDAHCG LARFIPFFGG AEFHDYHHYA GKKTKSNFSS VFRYCDYIYG TNKGYMYHKR SLAKLKMKEV KHNMKGSSGK ED
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.