Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06258 | Canola | cytosol | 4.05 | 45.45 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.39 | 43.96 |
| CDX97357 | Canola | cytosol | 40.89 | 36.07 |
| CDY41294 | Canola | cytosol | 42.51 | 35.23 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 41.7 | 34.56 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 23.48 | 32.95 |
| GSMUA_Achr8P19400_001 | Banana | plastid | 30.77 | 31.8 |
| EER94557 | Sorghum | cytosol | 36.03 | 29.57 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 34.82 | 28.57 |
| TraesCS1B01G219200.2 | Wheat | plasma membrane | 34.41 | 28.33 |
| GSMUA_Achr5P18800_001 | Banana | cytosol, peroxisome, plasma membrane | 34.41 | 28.33 |
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 34.41 | 28.24 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 34.41 | 28.24 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 34.41 | 28.24 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 34.41 | 28.05 |
| GSMUA_Achr11P... | Banana | plasma membrane | 33.2 | 27.06 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 31.17 | 26.28 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 31.58 | 25.57 |
| CDX82968 | Canola | plasma membrane | 38.87 | 25.53 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 29.96 | 25.34 |
| TraesCS4B01G332500.1 | Wheat | plasma membrane | 29.55 | 25.17 |
| Os03t0108500-01 | Rice | cytosol | 30.36 | 25.0 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 30.36 | 24.92 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 30.36 | 24.92 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 30.36 | 24.92 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 29.15 | 24.83 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 29.96 | 24.75 |
| TraesCS7A01G013400.1 | Wheat | plasma membrane | 29.96 | 24.67 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 29.96 | 24.58 |
| OQU80062 | Sorghum | plasma membrane | 29.96 | 24.5 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 28.34 | 24.39 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 27.94 | 24.38 |
| TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 28.74 | 23.91 |
| TraesCSU01G085800.1 | Wheat | cytosol, plasma membrane, plastid | 28.74 | 23.75 |
| Zm00001d041458_P001 | Maize | plasma membrane | 27.53 | 23.21 |
| TraesCS1D01G008900.1 | Wheat | plasma membrane | 27.94 | 23.08 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 27.13 | 22.71 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 26.32 | 22.26 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 27.13 | 22.26 |
| CDY41295 | Canola | cytosol | 23.08 | 22.09 |
| Zm00001d029810_P001 | Maize | mitochondrion | 36.44 | 21.95 |
| CDY51371 | Canola | cytosol | 23.08 | 21.92 |
| TraesCS5D01G422900.1 | Wheat | plasma membrane | 25.1 | 21.38 |
| CDY68059 | Canola | cytosol, plasma membrane | 22.67 | 21.05 |
| TraesCS5A01G414500.1 | Wheat | plasma membrane | 24.7 | 21.03 |
| CDY09918 | Canola | cytosol, plasma membrane | 21.86 | 20.69 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 22.67 | 20.29 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 30.77 | 19.95 |
| CDX97889 | Canola | golgi, plasma membrane | 23.48 | 18.35 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 15.38 | 16.67 |
| CDY06257 | Canola | cytosol, plastid | 13.36 | 16.58 |
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 10.93 | 12.39 |
| CDX86488 | Canola | cytosol | 23.89 | 11.9 |
| CDY10274 | Canola | cytosol | 23.89 | 10.75 |
Protein Annotations
| EnsemblPlants:CDX94121 | EnsemblPlantsGene:GSBRNA2T00157034001 | GO:A0A078DY27 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:Fatty_acid_hydroxylase | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF67 | PFAM:PF04116 |
| ProteinID:CDX94121 | ProteinID:CDX94121.1 | UniParc:UPI0004EEE1EF | MapMan:50.1.13 | : | : |
Description
BnaC07g37550D
Coordinates
chrLK031879:-:809001..810436
Molecular Weight (calculated)
29084.9 Da
IEP (calculated)
7.678
GRAVY (calculated)
-0.873
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSLIRFHK YKSSDITLGL KKITPRHQSK YSPDQLYNRQ NPANNDDTLF FSLNLTPSLS PRNECRHLTM IPYATIEEAE TSRDSRQFGS NTPPQGWFDR
101: YNIQPKVKNS FSDHVSLLQR RHEDVHPRRC PLTTRFLSFD PDLSDESRTL WLWIALRQIE AIESLLDTTY DFPWTLTNYI PFYGGAEYHD YHHYVGGQSQ
201: SNFASVFTYC DYIYGTDKGY RLQKKLLQQI KEDSKKSNKQ NGEEKLD
101: YNIQPKVKNS FSDHVSLLQR RHEDVHPRRC PLTTRFLSFD PDLSDESRTL WLWIALRQIE AIESLLDTTY DFPWTLTNYI PFYGGAEYHD YHHYVGGQSQ
201: SNFASVFTYC DYIYGTDKGY RLQKKLLQQI KEDSKKSNKQ NGEEKLD
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.