Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 94.68 | 94.68 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 94.35 | 94.35 |
| TraesCS1B01G219200.2 | Wheat | plasma membrane | 93.36 | 93.67 |
| EER94557 | Sorghum | cytosol | 86.38 | 86.38 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 84.05 | 84.05 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.18 | 74.73 |
| GSMUA_Achr11P... | Banana | plasma membrane | 72.76 | 72.28 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 50.83 | 71.83 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 71.43 | 70.96 |
| KRH04041 | Soybean | endoplasmic reticulum | 50.83 | 70.18 |
| KRH57309 | Soybean | endoplasmic reticulum | 67.77 | 68.69 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 65.12 | 67.12 |
| CDY41294 | Canola | cytosol | 66.11 | 66.78 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 38.87 | 66.48 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 65.78 | 66.44 |
| CDX97357 | Canola | cytosol | 61.79 | 66.43 |
| Solyc08g079570.2.1 | Tomato | cytosol | 65.12 | 66.22 |
| AT4G22756.1 | Thale cress | plasma membrane | 65.45 | 65.89 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 61.79 | 65.72 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 48.17 | 65.61 |
| Bra033117.1-P | Field mustard | cytosol | 64.78 | 65.44 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 61.79 | 64.81 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 64.12 | 64.77 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 61.13 | 63.23 |
| Zm00001d029810_P001 | Maize | mitochondrion | 85.38 | 62.68 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 60.8 | 60.8 |
| CDY41295 | Canola | cytosol | 51.83 | 60.47 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 55.15 | 56.66 |
| Solyc01g091320.2.1 | Tomato | cytosol | 54.82 | 55.0 |
| PGSC0003DMT400033236 | Potato | cytosol | 53.82 | 54.0 |
| KRH57571 | Soybean | plastid | 19.93 | 53.57 |
| CDX82968 | Canola | plasma membrane | 64.45 | 51.6 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 63.46 | 50.13 |
| Bra013643.1-P | Field mustard | cytosol | 65.78 | 44.59 |
| CDX94121 | Canola | cytosol | 28.24 | 34.41 |
Protein Annotations
| MapMan:5.5.2.1 | EMBL:AK355939 | EMBL:AK365474 | EMBL:AK371570 | UniProt:F2CWD6 | InterPro:Fatty_acid_hydroxylase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:HORVU1Hr1G052890 | EnsemblPlants:HORVU1Hr1G052890.1 | PFAM:PF04116 | PANTHER:PTHR11863 |
| PANTHER:PTHR11863:SF67 | TMHMM:TMhelix | UniParc:UPI0002004C53 | SEG:seg | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CWD6]
Coordinates
chrchr1H:+:391316151..391319435
Molecular Weight (calculated)
34180.4 Da
IEP (calculated)
7.003
GRAVY (calculated)
0.131
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPWATAAEA EAALGRPMTP AEALWFRWTA GTPDYGLYCL NILFLLLVFT LAPLPVALLE LRAPRAVGPY KLQPRVRLSR ADFLKCYGDV MRIFFLVIGP
101: LQLVSYPAVK MVGIHTGLPL PSLGEMAAQL VVYFLVEDYL NYWIHRLLHG EWGYEKIHRI HHEYTAPIGF AAPYAHWAEV LILGIPSFAG PAIAPGHMIT
201: FWLWIILRQM EAIDTHSGFD FPFSLTKYIP FYGGAEYHDY HHYVGGQSQS NFASVFTYCD YLYGTDRGYR FHKAYLAKLK DLEPSDGKKE DANGFSYAKL
301: D
101: LQLVSYPAVK MVGIHTGLPL PSLGEMAAQL VVYFLVEDYL NYWIHRLLHG EWGYEKIHRI HHEYTAPIGF AAPYAHWAEV LILGIPSFAG PAIAPGHMIT
201: FWLWIILRQM EAIDTHSGFD FPFSLTKYIP FYGGAEYHDY HHYVGGQSQS NFASVFTYCD YLYGTDRGYR FHKAYLAKLK DLEPSDGKKE DANGFSYAKL
301: D
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.