Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97357 | Canola | cytosol | 91.95 | 97.86 |
| Bra033117.1-P | Field mustard | cytosol | 96.64 | 96.64 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 92.62 | 92.62 |
| CDY41294 | Canola | cytosol | 85.57 | 85.57 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 47.65 | 78.02 |
| CDY41295 | Canola | cytosol | 65.77 | 75.97 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 53.36 | 74.65 |
| Solyc08g079570.2.1 | Tomato | cytosol | 71.14 | 71.62 |
| CDX82968 | Canola | plasma membrane | 82.55 | 65.43 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 66.44 | 65.35 |
| GSMUA_Achr11P... | Banana | plasma membrane | 66.11 | 65.02 |
| TraesCS1B01G219200.2 | Wheat | plasma membrane | 64.77 | 64.33 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 64.77 | 64.12 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 64.77 | 64.12 |
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 64.77 | 64.12 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 64.77 | 64.12 |
| EER94557 | Sorghum | cytosol | 63.76 | 63.12 |
| GSMUA_Achr8P19400_001 | Banana | plastid | 50.34 | 62.76 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 59.06 | 60.07 |
| GSMUA_Achr5P18800_001 | Banana | cytosol, peroxisome, plasma membrane | 60.4 | 60.0 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 34.23 | 57.95 |
| TraesCS4B01G332500.1 | Wheat | plasma membrane | 54.36 | 55.86 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 53.69 | 55.17 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 54.03 | 55.14 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 52.01 | 54.77 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 56.04 | 54.75 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 52.68 | 54.7 |
| Os03t0108500-01 | Rice | cytosol | 54.7 | 54.33 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 54.03 | 53.85 |
| TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 52.68 | 52.86 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 52.35 | 51.83 |
| TraesCS1D01G008900.1 | Wheat | plasma membrane | 51.34 | 51.17 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 51.68 | 51.16 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 51.68 | 51.16 |
| TraesCS5D01G422900.1 | Wheat | plasma membrane | 49.66 | 51.03 |
| TraesCSU01G085800.1 | Wheat | cytosol, plasma membrane, plastid | 51.01 | 50.84 |
| TraesCS5A01G414500.1 | Wheat | plasma membrane | 49.33 | 50.69 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 51.01 | 50.5 |
| TraesCS7A01G013400.1 | Wheat | plasma membrane | 50.0 | 49.67 |
| OQU80062 | Sorghum | plasma membrane | 49.66 | 49.01 |
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 35.57 | 48.62 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 47.99 | 48.47 |
| Zm00001d029810_P001 | Maize | mitochondrion | 64.77 | 47.07 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 46.98 | 46.51 |
| Zm00001d041458_P001 | Maize | plasma membrane | 45.64 | 46.42 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 35.23 | 46.05 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 42.28 | 43.15 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 53.69 | 41.99 |
| CDX94121 | Canola | cytosol | 34.56 | 41.7 |
| CDY09918 | Canola | cytosol, plasma membrane | 35.57 | 40.61 |
| CDY68059 | Canola | cytosol, plasma membrane | 35.57 | 39.85 |
| CDY51371 | Canola | cytosol | 34.56 | 39.62 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 35.23 | 38.04 |
| CDY06258 | Canola | cytosol | 2.68 | 36.36 |
| CDY06257 | Canola | cytosol, plastid | 23.83 | 35.68 |
| CDX97889 | Canola | golgi, plasma membrane | 33.89 | 31.96 |
| CDX86488 | Canola | cytosol | 36.58 | 21.98 |
| CDY10274 | Canola | cytosol | 35.91 | 19.49 |
Protein Annotations
| MapMan:5.5.2.1 | GO:A0A078ETR5 | EnsemblPlants:CDY04397 | ProteinID:CDY04397 | ProteinID:CDY04397.1 | InterPro:Fatty_acid_hydroxylase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00118398001 |
| PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF67 | TMHMM:TMhelix | UniParc:UPI0004EE40E0 | SEG:seg |
Description
BnaC02g28510D
Coordinates
chrLK031953:+:440040..441952
Molecular Weight (calculated)
34698.7 Da
IEP (calculated)
7.192
GRAVY (calculated)
-0.041
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPYVTVEEA SFALGRNLTW LETVWFDYSA TKSDYYLYCH NILFLFLVFS LAPIPLVFVE LARSVSGWFD RYKIQPKVNY SLSDMFGCYK DVMKMFILVV
101: GPLQLVSYPS IQMIGIRSGL PLPTLSEMLP QLFVYFLIED YTNYWVHRFF HSKWGYENIH RVHHEYTAPT GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYVYGTEKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIGIRSGL PLPTLSEMLP QLFVYFLIED YTNYWVHRFF HSKWGYENIH RVHHEYTAPT GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYVYGTEKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.