Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- cytosol 2
- vacuole 2
- extracellular 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G332500.1 | Wheat | plasma membrane | 72.0 | 74.48 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 72.33 | 74.32 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 70.67 | 73.1 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 72.0 | 72.24 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 65.0 | 64.78 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 38.0 | 62.64 |
| GSMUA_Achr11P... | Banana | plasma membrane | 63.0 | 62.38 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 63.0 | 62.38 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 47.0 | 61.84 |
| KRH04041 | Soybean | endoplasmic reticulum | 43.33 | 59.63 |
| KRH57309 | Soybean | endoplasmic reticulum | 58.67 | 59.26 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 41.67 | 58.69 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 72.0 | 56.69 |
| Bra033117.1-P | Field mustard | cytosol | 55.33 | 55.7 |
| CDY41294 | Canola | cytosol | 55.0 | 55.37 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 55.0 | 55.37 |
| CDX97357 | Canola | cytosol | 51.67 | 55.36 |
| Solyc08g079570.2.1 | Tomato | cytosol | 54.33 | 55.07 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 40.33 | 54.75 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 54.33 | 54.7 |
| AT4G22756.1 | Thale cress | plasma membrane | 54.0 | 54.18 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 52.0 | 53.61 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 51.33 | 52.56 |
| Solyc01g091320.2.1 | Tomato | cytosol | 52.0 | 52.0 |
| PGSC0003DMT400033236 | Potato | cytosol | 50.67 | 50.67 |
| CDY41295 | Canola | cytosol | 43.33 | 50.39 |
| KRH57571 | Soybean | plastid | 17.67 | 47.32 |
| CDX82968 | Canola | plasma membrane | 54.0 | 43.09 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 32.33 | 36.47 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 32.33 | 36.19 |
| Bra013643.1-P | Field mustard | cytosol | 53.33 | 36.04 |
| CDX94121 | Canola | cytosol | 25.0 | 30.36 |
Protein Annotations
| EntrezGene:4331338 | MapMan:5.5.2.1 | ProteinID:ABF93565.1 | EMBL:AK108704 | ProteinID:BAF10615.1 | ProteinID:BAS81897.1 |
| ProteinID:EEE58181.1 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:Os03g0108500 |
| EnsemblPlants:Os03t0108500-01 | PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF51 | UniProt:Q10SX1 | TMHMM:TMhelix |
| UniParc:UPI0000DB4460 | RefSeq:XP_015628395.1 | SEG:seg | : | : | : |
Description
Similar to 4,4-dimethyl-sterol C4-methyl-oxidase (Fragment). (Os03t0108500-01)
Coordinates
chr3:-:499919..501855
Molecular Weight (calculated)
33621.6 Da
IEP (calculated)
8.024
GRAVY (calculated)
0.109
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPYATAAEA EAAVGRGLTW AEAAWFRYSA AIPDYCLYCH NVPILLLVYT LAPLPLALLE LRRHLPLPHK LQPGVRHPPA AFLRCYAATA RVLLLAVGPV
101: QLASFPAVRA VGIRTGLPLP SAGETAAQVA VYLLVEDYLG YWIHRLLHTP WAYHHIHRVH HEFTAPMGYA APYAHWAEIL ILGFPAFAGP AIVPCHMTTF
201: WLWFVLRHLE AIHIHSGFKL PFDPTKYIPL YGGVEYHDYH HFVGGHSQSN FSSVFTFCDY IYGTDRGYRY HKASLSKLKE MAGNHVEKGD ENGFGNGKQD
101: QLASFPAVRA VGIRTGLPLP SAGETAAQVA VYLLVEDYLG YWIHRLLHTP WAYHHIHRVH HEFTAPMGYA APYAHWAEIL ILGFPAFAGP AIVPCHMTTF
201: WLWFVLRHLE AIHIHSGFKL PFDPTKYIPL YGGVEYHDYH HFVGGHSQSN FSSVFTFCDY IYGTDRGYRY HKASLSKLKE MAGNHVEKGD ENGFGNGKQD
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.