Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- vacuole 2
- extracellular 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 84.33 | 84.96 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 79.85 | 80.75 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 79.85 | 80.15 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 76.49 | 77.65 |
| CDY09918 | Canola | cytosol, plasma membrane | 71.64 | 73.56 |
| CDY51371 | Canola | cytosol | 71.27 | 73.46 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 72.39 | 73.21 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 72.39 | 72.93 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 72.76 | 72.49 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 71.64 | 72.18 |
| CDY68059 | Canola | cytosol, plasma membrane | 71.64 | 72.18 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 72.39 | 72.12 |
| KRH74668 | Soybean | extracellular, plasma membrane | 72.39 | 71.59 |
| VIT_13s0019g02210.t01 | Wine grape | extracellular, golgi | 72.76 | 71.43 |
| AT2G29390.1 | Thale cress | cytosol | 72.39 | 71.32 |
| KRH69485 | Soybean | mitochondrion | 71.64 | 70.85 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 72.39 | 70.29 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 70.9 | 70.11 |
| GSMUA_Achr10P... | Banana | cytosol | 79.48 | 69.84 |
| CDX97889 | Canola | golgi, plasma membrane | 71.27 | 60.44 |
| CDY06258 | Canola | cytosol | 4.85 | 59.09 |
| CDY06257 | Canola | cytosol, plastid | 43.66 | 58.79 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 69.4 | 57.94 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 46.27 | 43.82 |
| CDX86488 | Canola | cytosol | 71.64 | 38.71 |
| Bra030681.1-P | Field mustard | cytosol | 71.27 | 36.94 |
| CDY10274 | Canola | cytosol | 71.64 | 34.97 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 37.69 | 33.55 |
| Os03t0108500-01 | Rice | cytosol | 36.19 | 32.33 |
Protein Annotations
| EntrezGene:4342171 | MapMan:5.5.2.1 | ProteinID:BAD31829.1 | ProteinID:BAF20592.1 | ProteinID:BAS99681.1 | InterPro:Fatty_acid_hydroxylase |
| GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 | GO:GO:0055114 | GO:GO:0080065 | EnsemblPlantsGene:Os07g0101500 |
| EnsemblPlants:Os07t0101500-01 | PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 | UniProt:Q69L93 | TMHMM:TMhelix |
| UniParc:UPI00001BF751 | RefSeq:XP_015646592.1 | RefSeq:XP_015646593.1 | SEG:seg | : | : |
Description
Glossy1-homologous gene 8Similar to Sterol 4-alpha-methyl-oxidase (Fragment). (Os07t0101500-01)
Coordinates
chr7:+:88419..90483
Molecular Weight (calculated)
31299.8 Da
IEP (calculated)
8.261
GRAVY (calculated)
0.068
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAAAGLESA WEYLITHFSE FQLASIGTFL LHESVFFLSG LPSLLFERLG LFSKYKIQKK SNTPDYQNRC VVRLVLYHVC VNLPLTILSY RTFKFMGLRS
101: TLPLPHWTVV VSQVLFFFVL EDFIFYWGHR ALHTKWLYQH VHSVHHEYAT PFGLTSEYAH PAEILFLGFA TVAGPALTGP HLFTLWVWMV LRVLETVEAH
201: SGYHFPWSPS NFLPLYGGAE FHDYHHRVLY TKSGNYSSTF IYMDWLFGTD KDYRKTKALE EKERTKHL
101: TLPLPHWTVV VSQVLFFFVL EDFIFYWGHR ALHTKWLYQH VHSVHHEYAT PFGLTSEYAH PAEILFLGFA TVAGPALTGP HLFTLWVWMV LRVLETVEAH
201: SGYHFPWSPS NFLPLYGGAE FHDYHHRVLY TKSGNYSSTF IYMDWLFGTD KDYRKTKALE EKERTKHL
001: MDSLVESGWK YLVTHFSDFQ LACIGSFILH ESVFFLSGLP YIFLERTGFL SNYKIQTKSN TPEAQGKCIA RLLLYHCCVN LPLMMASYPV FRFMGMESSF
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
Arabidopsis Description
SMO2-1Methylsterol monooxygenase 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.