Factsheet for GSMUA_Achr10P26550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10640_001	Banana	extracellular, plasma membrane	80.33	92.45
GSMUA_Achr9P03480_001	Banana	endoplasmic reticulum, plasma membrane	78.03	89.14
GSMUA_Achr6P04970_001	Banana	extracellular, plasma membrane	73.77	85.23
TraesCS4D01G134600.1	Wheat	endoplasmic reticulum	72.46	83.08
TraesCS4B01G139900.1	Wheat	endoplasmic reticulum	72.46	83.08
TraesCS4A01G179800.1	Wheat	endoplasmic reticulum	72.13	82.71
Zm00001d048585_P002	Maize	plasma membrane	71.48	81.34
Os11t0707600-02	Rice	cytosol, endoplasmic reticulum, plasma membrane	70.49	80.83
EER92925	Sorghum	endoplasmic reticulum, plasma membrane	70.49	80.22
Os07t0101500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	69.84	79.48
Zm00001d011765_P002	Maize	endoplasmic reticulum	68.2	78.49
CDY09918	Canola	cytosol, plasma membrane	65.57	76.63
CDY68059	Canola	cytosol, plasma membrane	66.56	76.32
AT1G07420.1	Thale cress	endoplasmic reticulum, golgi	66.23	75.94
PGSC0003DMT400078196	Potato	endoplasmic reticulum, plasma membrane	66.89	75.84
AT2G29390.1	Thale cress	cytosol	67.54	75.74
KRH69485	Soybean	mitochondrion	67.21	75.65
KRH74668	Soybean	extracellular, plasma membrane	67.21	75.65
Solyc06g076410.2.1	Tomato	endoplasmic reticulum, plasma membrane	66.56	75.46
VIT_13s0019g02210.t01	Wine grape	extracellular, golgi	67.54	75.46
CDY51371	Canola	cytosol	64.26	75.38
Solyc06g005750.2.1	Tomato	extracellular, plasma membrane	65.25	75.09
VIT_06s0004g05470.t01	Wine grape	extracellular, plasma membrane	66.56	74.91
CDY06704	Canola	endoplasmic reticulum, plasma membrane	67.54	74.64
PGSC0003DMT400005519	Potato	extracellular, plasma membrane	64.92	74.44
CDY06257	Canola	cytosol, plastid	40.33	61.81
CDX97889	Canola	golgi, plasma membrane	63.93	61.71
Bra039978.1-P	Field mustard	endoplasmic reticulum, golgi	62.62	59.5
CDY06258	Canola	cytosol	4.26	59.09
KRH74671	Soybean	endoplasmic reticulum, extracellular, plasma membrane	42.3	45.58
CDX86488	Canola	cytosol	65.57	40.32
Bra030681.1-P	Field mustard	cytosol	65.9	38.88
CDY10274	Canola	cytosol	66.56	36.98
GSMUA_Achr8P19400_001	Banana	plastid	28.52	36.4
GSMUA_Achr11P...	Banana	plasma membrane	33.11	33.33
GSMUA_Achr5P19760_001	Banana	plasma membrane	32.79	33.0
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	32.13	32.13
GSMUA_Achr5P18800_001	Banana	cytosol, peroxisome, plasma membrane	31.48	32.0

Protein Annotations

MapMan:5.5.2.1	InterPro:Fatty_acid_hydroxylase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G26550_001	EnsemblPlants:GSMUA_Achr10P26550_001
EnsemblPlants:GSMUA_Achr10T26550_001	UniProt:M0RLM9	PFAM:PF04116	PANTHER:PTHR11863	PANTHER:PTHR11863:SF96	TMHMM:TMhelix
UniParc:UPI00029519A2	SEG:seg	:	:	:	:

Description

Putative C-4 methylsterol oxidase DDB_G0270946 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26550_001]

Coordinates

chr10:+:30056010..30060267

Molecular Weight (calculated)

35374.9 Da

IEP (calculated)

8.324

GRAVY (calculated)

0.098

Length

305 amino acids

Sequence
(BLAST)

001: MTDCRHNVAL ERNLLSRALP RLLHLKSGID VAGDRPPTPS MASLLDSCWL YLITHFSEFQ LATVGTFLIH ESIFFLSGLP SIYFERSGLF SKYKIQKKSN
101: TSEAQEKCIV RLVLYHVCVN LPVMLVSYPT FRFMGLRSSL PLPHWSVIIS QIIFYFILED FVFYWGHRIL HTKWLYKHVH SIHHEYATPF GLTSEYAHPA
201: EILFLGFATV VGPALTGPHL FTLWLWMILR VLETVEAHSG YHFPWSPSNF LPLYGGADFH DYHHRVLYTK SGNYASTFVY MDWLFGTDKG YRKLRAIEEV
301: EGKNY

Best Arabidopsis Sequence Match ( AT2G29390.2 )
(BLAST)

001: MDSLVESGWK YLVTHFSDFQ LACIGSFILH ESVFFLSGLP YIFLERTGFL SNYKIQTKSN TPEAQGKCIA RLLLYHCCVN LPLMMASYPV FRFMGMESSF
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET

Arabidopsis Description

SMO2-1Methylsterol monooxygenase 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.