Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51371 | Canola | cytosol | 87.87 | 91.92 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 86.76 | 88.72 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 80.15 | 81.04 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 79.78 | 80.67 |
| KRH69485 | Soybean | mitochondrion | 80.15 | 80.44 |
| KRH74668 | Soybean | extracellular, plasma membrane | 79.41 | 79.7 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 78.31 | 78.6 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 76.1 | 77.53 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 75.37 | 77.36 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 74.63 | 76.89 |
| CDX97889 | Canola | golgi, plasma membrane | 87.87 | 75.63 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 73.9 | 75.56 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 73.53 | 75.47 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 71.32 | 72.39 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 70.22 | 71.8 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 70.22 | 71.8 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 70.22 | 71.8 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 70.22 | 71.27 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 69.49 | 71.05 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 83.46 | 70.72 |
| Zm00001d048585_P002 | Maize | plasma membrane | 69.49 | 70.52 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 68.38 | 70.19 |
| GSMUA_Achr10P... | Banana | cytosol | 75.74 | 67.54 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 50.37 | 48.41 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 38.6 | 35.23 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 37.13 | 34.71 |
| AT4G22756.1 | Thale cress | plasma membrane | 37.87 | 34.45 |
Protein Annotations
| MapMan:5.5.2.1 | EntrezGene:817488 | ProteinID:AAC95199.2 | ProteinID:AEC08245.1 | ProteinID:AEC08246.1 | ProteinID:AEC08247.1 |
| ProteinID:AEC08248.1 | ProteinID:AEC08249.1 | EMBL:AF222719 | EMBL:AF327853 | ProteinID:ANM61554.1 | ArrayExpress:AT2G29390 |
| EnsemblPlantsGene:AT2G29390 | RefSeq:AT2G29390 | TAIR:AT2G29390 | RefSeq:AT2G29390-TAIR-G | EnsemblPlants:AT2G29390.1 | TAIR:AT2G29390.1 |
| Symbol:ATSMO2 | EMBL:AY086287 | Unigene:At.27345 | EMBL:BT002780 | EMBL:BT005125 | InterPro:Fatty_acid_hydroxylase |
| GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008202 | GO:GO:0008610 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 |
| GO:GO:0055114 | GO:GO:0080065 | RefSeq:NP_001077974.1 | RefSeq:NP_001077975.1 | RefSeq:NP_001318311.1 | RefSeq:NP_565681.1 |
| RefSeq:NP_850133.1 | RefSeq:NP_973559.1 | PFAM:PF04116 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11863 |
| PANTHER:PTHR11863:SF96 | UniProt:Q9ZW22 | Symbol:SMO2-2 | TMHMM:TMhelix | UniParc:UPI00000A678E | : |
Description
SMO2-1Methylsterol monooxygenase 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW22]
Coordinates
chr2:-:12610543..12612894
Molecular Weight (calculated)
31650.4 Da
IEP (calculated)
7.450
GRAVY (calculated)
0.190
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLVESGWK YLVTHFSDFQ LACIGSFILH ESVFFLSGLP YIFLERTGFL SNYKIQTKSN TPEAQGKCIA RLLLYHCCVN LPLMMASYPV FRFMGMESSF
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGSLIL MWESFAYSAD FHDYHHRLLY TKSGNYSSTF VYMDWIFGTD KGYRKLKALK ET
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGSLIL MWESFAYSAD FHDYHHRLLY TKSGNYSSTF VYMDWIFGTD KGYRKLKALK ET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.