Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09918 | Canola | cytosol, plasma membrane | 94.74 | 96.55 |
| CDY68059 | Canola | cytosol, plasma membrane | 95.86 | 95.86 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 94.74 | 91.3 |
| CDY06258 | Canola | cytosol | 7.52 | 90.91 |
| AT2G29390.1 | Thale cress | cytosol | 88.72 | 86.76 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 85.34 | 84.39 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 84.96 | 84.01 |
| KRH69485 | Soybean | mitochondrion | 85.34 | 83.76 |
| KRH74668 | Soybean | extracellular, plasma membrane | 84.59 | 83.03 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 83.83 | 82.29 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 76.69 | 76.98 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 75.94 | 76.52 |
| CDY06257 | Canola | cytosol, plastid | 57.14 | 76.38 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 76.32 | 76.03 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 74.81 | 75.09 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 74.81 | 74.81 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 72.18 | 71.64 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 72.18 | 71.64 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 71.43 | 71.43 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 71.05 | 71.05 |
| Zm00001d048585_P002 | Maize | plasma membrane | 71.43 | 70.9 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 70.68 | 70.68 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 70.68 | 70.68 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 70.3 | 70.57 |
| GSMUA_Achr10P... | Banana | cytosol | 75.94 | 66.23 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 52.63 | 49.47 |
| CDX86488 | Canola | cytosol | 91.73 | 49.19 |
| Bra030681.1-P | Field mustard | cytosol | 92.11 | 47.39 |
| CDY10274 | Canola | cytosol | 91.35 | 44.26 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 41.35 | 36.91 |
| AT4G22756.1 | Thale cress | plasma membrane | 40.6 | 36.12 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 38.72 | 35.4 |
Protein Annotations
| MapMan:5.5.2.1 | EntrezGene:837254 | UniProt:A0A178WAJ4 | ProteinID:AAF79571.1 | ProteinID:AEE28122.1 | ProteinID:AEE28123.1 |
| EMBL:AF346734 | EMBL:AK316820 | ArrayExpress:AT1G07420 | EnsemblPlantsGene:AT1G07420 | RefSeq:AT1G07420 | TAIR:AT1G07420 |
| RefSeq:AT1G07420-TAIR-G | EnsemblPlants:AT1G07420.1 | TAIR:AT1G07420.1 | Symbol:ATSMO2 | EMBL:AY087267 | Unigene:At.27344 |
| EMBL:BT044610 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000003 | GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008202 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0009536 |
| GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 | GO:GO:0055114 | GO:GO:0080065 | RefSeq:NP_563789.1 |
| RefSeq:NP_973777.1 | ProteinID:OAP14801.1 | PFAM:PF04116 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 |
| UniProt:Q8VWZ8 | TMHMM:TMhelix | UniParc:UPI00000ACCBE | : | : | : |
Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
Coordinates
chr1:+:2277555..2280502
Molecular Weight (calculated)
30928.4 Da
IEP (calculated)
8.697
GRAVY (calculated)
0.098
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.