Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 97.74 | 97.37 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 81.51 | 80.3 |
| CDY51371 | Canola | cytosol | 75.47 | 76.92 |
| CDY09918 | Canola | cytosol, plasma membrane | 74.72 | 75.86 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 75.47 | 75.47 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 76.98 | 75.28 |
| CDY68059 | Canola | cytosol, plasma membrane | 75.47 | 75.19 |
| KRH74668 | Soybean | extracellular, plasma membrane | 76.6 | 74.91 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 75.09 | 74.81 |
| KRH69485 | Soybean | mitochondrion | 75.85 | 74.17 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 74.34 | 74.06 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 74.34 | 73.78 |
| AT2G29390.1 | Thale cress | cytosol | 75.47 | 73.53 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 73.58 | 73.31 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 73.58 | 73.31 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 76.23 | 73.19 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 73.96 | 73.13 |
| Zm00001d048585_P002 | Maize | plasma membrane | 73.58 | 72.76 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 72.45 | 72.73 |
| CDY06258 | Canola | cytosol | 6.04 | 72.73 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 73.21 | 72.39 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 72.08 | 72.08 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 71.32 | 71.05 |
| GSMUA_Achr10P... | Banana | cytosol | 75.09 | 65.25 |
| CDX97889 | Canola | golgi, plasma membrane | 75.47 | 63.29 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 73.58 | 60.75 |
| CDY06257 | Canola | cytosol, plastid | 45.28 | 60.3 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 49.43 | 46.29 |
| CDX86488 | Canola | cytosol | 73.58 | 39.31 |
| Bra030681.1-P | Field mustard | cytosol | 73.21 | 37.52 |
| CDY10274 | Canola | cytosol | 73.58 | 35.52 |
| Solyc08g079570.2.1 | Tomato | cytosol | 38.11 | 34.12 |
| Solyc01g091320.2.1 | Tomato | cytosol | 38.49 | 34.0 |
Protein Annotations
| MapMan:5.5.2.1 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 | GO:GO:0055114 |
| GO:GO:0080065 | UniProt:K4C357 | PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 | EnsemblPlantsGene:Solyc06g005750.2 |
| EnsemblPlants:Solyc06g005750.2.1 | TMHMM:TMhelix | UniParc:UPI0002765D2D | : | : | : |
Description
No Description!
Coordinates
chr6:-:785189..789735
Molecular Weight (calculated)
30763.5 Da
IEP (calculated)
9.100
GRAVY (calculated)
0.155
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MASMIESAWA FLLANFSDFQ LTSLGGFIVH ESAFFLSGIP FILFEKAGWF GKYKIQKKTN TPEAQQKCIT RLLIFHFCVN LPILIVTYPL FKFMGMRSTL
101: PLPSWKVVST QVLFYFILED FVFYWGHRVL HTKWLYKHVH SVHHEYATPF GLTSEYAHPA EILFLGFATV IGPAITGPHL ITLYLWISLR ILETVEAHSG
201: YHFPWSPSNF LPLYGGSDFH DYHHRLLYTK SGNYSSTFVY MDWLFGTDKG YRKLKMLKEQ EGKAM
101: PLPSWKVVST QVLFYFILED FVFYWGHRVL HTKWLYKHVH SVHHEYATPF GLTSEYAHPA EILFLGFATV IGPAITGPHL ITLYLWISLR ILETVEAHSG
201: YHFPWSPSNF LPLYGGSDFH DYHHRLLYTK SGNYSSTFVY MDWLFGTDKG YRKLKMLKEQ EGKAM
001: MDSLVESGWK YLVTHFSDFQ LACIGSFILH ESVFFLSGLP YIFLERTGFL SNYKIQTKSN TPEAQGKCIA RLLLYHCCVN LPLMMASYPV FRFMGMESSF
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
Arabidopsis Description
SMO2-1Methylsterol monooxygenase 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.