Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68059 | Canola | cytosol, plasma membrane | 50.6 | 94.36 |
| CDY09918 | Canola | cytosol, plasma membrane | 48.59 | 92.34 |
| Bra030681.1-P | Field mustard | cytosol | 95.97 | 92.07 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 49.19 | 91.73 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 49.6 | 89.13 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 44.96 | 82.9 |
| CDY51371 | Canola | cytosol | 43.35 | 82.69 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 44.76 | 82.53 |
| KRH69485 | Soybean | mitochondrion | 43.95 | 80.44 |
| KRH74668 | Soybean | extracellular, plasma membrane | 43.75 | 80.07 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 42.94 | 78.6 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 39.72 | 74.34 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 39.52 | 74.24 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 39.92 | 74.16 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 39.31 | 73.58 |
| CDY06257 | Canola | cytosol, plastid | 29.44 | 73.37 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 39.31 | 73.31 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 38.71 | 72.18 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 38.51 | 71.8 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 38.51 | 71.8 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 38.71 | 71.64 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 38.1 | 71.05 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 37.9 | 70.94 |
| Zm00001d048585_P002 | Maize | plasma membrane | 38.31 | 70.9 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 38.31 | 70.9 |
| CDY10274 | Canola | cytosol | 78.02 | 70.49 |
| CDX97889 | Canola | golgi, plasma membrane | 43.55 | 68.35 |
| CDY06258 | Canola | cytosol | 3.02 | 68.18 |
| GSMUA_Achr10P... | Banana | cytosol | 40.32 | 65.57 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 27.62 | 48.41 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.53 | 45.05 |
| CDX97357 | Canola | cytosol | 21.57 | 38.21 |
| CDY41294 | Canola | cytosol | 22.18 | 36.91 |
| CDY41295 | Canola | cytosol | 19.15 | 36.82 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 21.98 | 36.58 |
| CDX82968 | Canola | plasma membrane | 22.18 | 29.26 |
| CDX94121 | Canola | cytosol | 11.9 | 23.89 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | MapMan:5.5.2.1 | GO:A0A078DGM1 | EnsemblPlants:CDX86488 | ProteinID:CDX86488 |
| ProteinID:CDX86488.1 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0016787 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00145085001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PFAM:PF04116 |
| PRINTS:PR00449 | ScanProsite:PS00675 | PFscan:PS51419 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Sigma_54_int_dom_ATP-bd_1 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE865C | SEG:seg | : | : |
Description
BnaC08g02150D
Coordinates
chrLK031846:-:100662..105518
Molecular Weight (calculated)
56218.6 Da
IEP (calculated)
7.954
GRAVY (calculated)
-0.023
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHRLDNEY DYLFKIVLIG DSGVGKSNIL SRFTRNEFCL ESKSTIGVEF ATRTLQVEGK TVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDITKRQT
101: FENSLRWLRE LRDHADSNIV IMMAGNKSDL NHLRSVADED GRSLAEKEGL SFLETSALEA SNIEKAFQTI LSEIYHIISK KALAAQEAAG GLPVPGQGTA
201: INISDSSSVC SLHSLPLLSL TPLSLRIDPA MGSFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIYLERHGFL TKYKIQAKNN TPAAQGKCIT
301: RLLLYHFCVN LPLMMASYPV FKAMGMRSSF PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI
401: VGPALTGPHL ITLWLWMVLR VLETVEAHCG YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKSLKEN SNLKQT
101: FENSLRWLRE LRDHADSNIV IMMAGNKSDL NHLRSVADED GRSLAEKEGL SFLETSALEA SNIEKAFQTI LSEIYHIISK KALAAQEAAG GLPVPGQGTA
201: INISDSSSVC SLHSLPLLSL TPLSLRIDPA MGSFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIYLERHGFL TKYKIQAKNN TPAAQGKCIT
301: RLLLYHFCVN LPLMMASYPV FKAMGMRSSF PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI
401: VGPALTGPHL ITLWLWMVLR VLETVEAHCG YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKSLKEN SNLKQT
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.