Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- extracellular 1
- golgi 1
- plasma membrane 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 99.62 | 99.62 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 96.99 | 96.99 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 90.6 | 90.6 |
| Zm00001d048585_P002 | Maize | plasma membrane | 90.98 | 90.3 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 89.85 | 89.18 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 86.84 | 87.17 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 82.71 | 83.02 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 80.83 | 81.44 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 80.45 | 80.15 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 73.31 | 73.58 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 73.31 | 73.31 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 73.68 | 72.86 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 73.31 | 72.49 |
| GSMUA_Achr10P... | Banana | cytosol | 83.08 | 72.46 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 73.68 | 72.32 |
| VIT_13s0019g02210.t01 | Wine grape | extracellular, golgi | 73.68 | 71.79 |
| CDY09918 | Canola | cytosol, plasma membrane | 70.3 | 71.65 |
| CDY51371 | Canola | cytosol | 69.92 | 71.54 |
| KRH74668 | Soybean | extracellular, plasma membrane | 72.56 | 71.22 |
| CDY68059 | Canola | cytosol, plasma membrane | 71.05 | 71.05 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 70.68 | 70.68 |
| KRH69485 | Soybean | mitochondrion | 71.8 | 70.48 |
| AT2G29390.1 | Thale cress | cytosol | 71.8 | 70.22 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 71.8 | 69.2 |
| CDX97889 | Canola | golgi, plasma membrane | 69.92 | 58.86 |
| CDY06257 | Canola | cytosol, plastid | 43.23 | 57.79 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 69.17 | 57.32 |
| CDY06258 | Canola | cytosol | 4.51 | 54.55 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 47.37 | 44.52 |
| CDX86488 | Canola | cytosol | 71.8 | 38.51 |
| Bra030681.1-P | Field mustard | cytosol | 71.43 | 36.75 |
| CDY10274 | Canola | cytosol | 71.8 | 34.79 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 36.47 | 33.45 |
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 36.47 | 32.23 |
| TraesCS1D01G008900.1 | Wheat | plasma membrane | 34.96 | 31.1 |
| TraesCS5D01G422900.1 | Wheat | plasma membrane | 33.83 | 31.03 |
| TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 34.59 | 30.98 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 34.21 | 30.23 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G134600.1 | EnsemblPlantsGene:TraesCS4D01G134600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:Fatty_acid_hydroxylase | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 | PFAM:PF04116 | TMHMM:TMhelix |
| MapMan:5.5.2.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:121432627..121439236
Molecular Weight (calculated)
31016.4 Da
IEP (calculated)
7.889
GRAVY (calculated)
0.128
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPLDSAW EWLITNFSEF QLATVVTFVL HESVFFLSGF PSLLFERFGL FAKYKIQKKS NTSDYQNRCV MRLILYHVCV NLPVMIFSYP AFKFMGLRSS
101: LPLPHWTVIV SQVLFYFILE DFIFYWGHRA LHTKWLYKHV HSVHHEYATP FGLTSEYAHP AEILFLGFAT VVGPALTGPH LFTLWLWMVL RVLETVEAHS
201: GYHFPWSPSN FLPLYGGSDF HDYHHRVLYT KSGNYASTFV YMDWLFGTDK GYRKTKAIEG EEGKHL
101: LPLPHWTVIV SQVLFYFILE DFIFYWGHRA LHTKWLYKHV HSVHHEYATP FGLTSEYAHP AEILFLGFAT VVGPALTGPH LFTLWLWMVL RVLETVEAHS
201: GYHFPWSPSN FLPLYGGSDF HDYHHRVLYT KSGNYASTFV YMDWLFGTDK GYRKTKAIEG EEGKHL
001: MDSLVESGWK YLVTHFSDFQ LACIGSFILH ESVFFLSGLP YIFLERTGFL SNYKIQTKSN TPEAQGKCIA RLLLYHCCVN LPLMMASYPV FRFMGMESSF
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
Arabidopsis Description
SMO2-1Methylsterol monooxygenase 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.