Factsheet for VIT_13s0019g02210.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 2
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum, vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05470.t01	Wine grape	extracellular, plasma membrane	83.15	83.76
GSMUA_Achr7P10640_001	Banana	extracellular, plasma membrane	75.46	77.74
GSMUA_Achr6P04970_001	Banana	extracellular, plasma membrane	74.36	76.89
GSMUA_Achr9P03480_001	Banana	endoplasmic reticulum, plasma membrane	74.36	76.03
TraesCS4A01G179800.1	Wheat	endoplasmic reticulum	72.16	74.06
TraesCS4B01G139900.1	Wheat	endoplasmic reticulum	72.16	74.06
TraesCS4D01G134600.1	Wheat	endoplasmic reticulum	71.79	73.68
Os07t0101500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	71.43	72.76
EER92925	Sorghum	endoplasmic reticulum, plasma membrane	70.7	72.01
Zm00001d011765_P002	Maize	endoplasmic reticulum	69.23	71.32
Zm00001d048585_P002	Maize	plasma membrane	69.96	71.27
Os11t0707600-02	Rice	cytosol, endoplasmic reticulum, plasma membrane	69.23	71.05
GSMUA_Achr10P...	Banana	cytosol	75.46	67.54
VIT_00s2125g00010.t01	Wine grape	cytosol	28.94	35.75

Protein Annotations

EntrezGene:100242817	wikigene:100242817	MapMan:5.5.2.1	ProteinID:CBI31626	ProteinID:CBI31626.3	UniProt:D7TLN9
EMBL:FN595998	InterPro:Fatty_acid_hydroxylase	GO:GO:0000254	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016126	GO:GO:0016491	GO:GO:0055114
GO:GO:0080065	EntrezGene:LOC100242817	wikigene:LOC100242817	PFAM:PF04116	PANTHER:PTHR11863	PANTHER:PTHR11863:SF96
TIGR:TC61488	TMHMM:TMhelix	UniParc:UPI00015C9756	ArrayExpress:VIT_13s0019g02210	EnsemblPlantsGene:VIT_13s0019g02210	EnsemblPlants:VIT_13s0019g02210.t01
unigene:Vvi.3057	RefSeq:XP_002282653	RefSeq:XP_002282653.1	RefSeq:XP_010658529.1	:	:

Description

No Description!

Coordinates

chr13:-:3480956..3487704

Molecular Weight (calculated)

31980.7 Da

IEP (calculated)

8.882

GRAVY (calculated)

0.096

Length

273 amino acids

Sequence
(BLAST)

001: MASILESAWQ YLITHFSDFQ LACLGSFFLH ESVFFLSGLP FIYLERLGYL SKYKIQTKNN TPAAQNKCIT RLLLYHFGVN LPVMIFSYPV FRYMGMQSSL
101: PLPSWKVILT QILFYFILED FVFYWGHRIL HTKWLYKHVH SIHHEYATPF GLTSEYAHPA EILFLGFATI LGPAITGPHL FTLWLWMVVR VLETVEAHCG
201: YHFPFSLSNF IPLYGGANFH DYHHRVLYTK SGNYSSTFVY MDWIFGTDKG YRKLQALKRY EAEASNNQTS REK

Best Arabidopsis Sequence Match ( AT1G07420.1 )
(BLAST)

001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT

Arabidopsis Description

SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.