Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68059 | Canola | cytosol, plasma membrane | 94.2 | 97.74 |
| CDY06258 | Canola | cytosol | 7.61 | 95.45 |
| CDY09918 | Canola | cytosol, plasma membrane | 90.22 | 95.4 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 91.3 | 94.74 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 83.33 | 85.5 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 82.97 | 85.13 |
| CDY51371 | Canola | cytosol | 80.07 | 85.0 |
| KRH74668 | Soybean | extracellular, plasma membrane | 82.61 | 84.13 |
| KRH69485 | Soybean | mitochondrion | 82.61 | 84.13 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 81.52 | 83.03 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 75.0 | 78.11 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 74.64 | 77.15 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 73.19 | 76.52 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 73.19 | 76.23 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 73.19 | 75.94 |
| CDY06257 | Canola | cytosol, plastid | 54.35 | 75.38 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 70.29 | 72.93 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 70.29 | 72.39 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 70.29 | 72.39 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 69.57 | 72.18 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 69.2 | 71.8 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 69.2 | 71.8 |
| Zm00001d048585_P002 | Maize | plasma membrane | 69.57 | 71.64 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 68.12 | 70.94 |
| CDX97889 | Canola | golgi, plasma membrane | 79.71 | 69.62 |
| GSMUA_Achr10P... | Banana | cytosol | 74.64 | 67.54 |
| CDX86488 | Canola | cytosol | 89.13 | 49.6 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 48.76 |
| CDY10274 | Canola | cytosol | 94.2 | 47.36 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.07 | 45.6 |
| CDX97357 | Canola | cytosol | 38.41 | 37.86 |
| CDY41295 | Canola | cytosol | 34.06 | 36.43 |
| CDY41294 | Canola | cytosol | 38.77 | 35.91 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 38.04 | 35.23 |
| CDX82968 | Canola | plasma membrane | 38.77 | 28.46 |
| CDX94121 | Canola | cytosol | 20.29 | 22.67 |
Protein Annotations
| EnsemblPlants:CDY06704 | EnsemblPlantsGene:GSBRNA2T00122884001 | GO:A0A078F1G9 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:Fatty_acid_hydroxylase | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 | PFAM:PF04116 |
| ProteinID:CDY06704 | ProteinID:CDY06704.1 | TMHMM:TMhelix | UniParc:UPI0004EE2D19 | MapMan:5.5.2.1 | : |
Description
BnaA10g04830D
Coordinates
chrLK031972:+:381634..383961
Molecular Weight (calculated)
32191.0 Da
IEP (calculated)
8.545
GRAVY (calculated)
0.090
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIYLERQGFL TKYKIQAKNN TPAAQEKCIT RLLLYHFCVN LPLMMASYPV FRAMGMRSSL
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HTKWLYKTVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGSLES KIYSRFADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKSLKEN SELKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HTKWLYKTVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGSLES KIYSRFADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKSLKEN SELKQT
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.