Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 97.86 | 91.95 |
| Bra033117.1-P | Field mustard | cytosol | 96.79 | 90.94 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 93.57 | 87.92 |
| CDY41294 | Canola | cytosol | 87.14 | 81.88 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 51.79 | 79.67 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 57.86 | 76.06 |
| CDY41295 | Canola | cytosol | 64.64 | 70.16 |
| Solyc08g079570.2.1 | Tomato | cytosol | 73.21 | 69.26 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 68.21 | 63.04 |
| CDX82968 | Canola | plasma membrane | 84.29 | 62.77 |
| TraesCS1B01G219200.2 | Wheat | plasma membrane | 66.43 | 62.0 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 66.43 | 61.79 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 66.43 | 61.79 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 66.43 | 61.79 |
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 66.43 | 61.79 |
| GSMUA_Achr11P... | Banana | plasma membrane | 66.79 | 61.72 |
| EER94557 | Sorghum | cytosol | 65.36 | 60.8 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 37.14 | 59.09 |
| GSMUA_Achr8P19400_001 | Banana | plastid | 50.36 | 59.0 |
| GSMUA_Achr5P18800_001 | Banana | cytosol, peroxisome, plasma membrane | 61.43 | 57.33 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 59.64 | 57.0 |
| TraesCS4B01G332500.1 | Wheat | plasma membrane | 55.0 | 53.1 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 57.5 | 52.79 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 55.0 | 52.74 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 54.29 | 52.41 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 52.86 | 52.3 |
| Os03t0108500-01 | Rice | cytosol | 55.36 | 51.67 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 52.86 | 51.57 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 54.64 | 51.17 |
| TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 53.93 | 50.84 |
| TraesCS1D01G008900.1 | Wheat | plasma membrane | 52.5 | 49.16 |
| TraesCS5D01G422900.1 | Wheat | plasma membrane | 50.71 | 48.97 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 52.5 | 48.84 |
| TraesCSU01G085800.1 | Wheat | cytosol, plasma membrane, plastid | 52.14 | 48.83 |
| TraesCS5A01G414500.1 | Wheat | plasma membrane | 50.0 | 48.28 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 51.79 | 48.17 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 51.79 | 48.17 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 51.43 | 47.84 |
| TraesCS7A01G013400.1 | Wheat | plasma membrane | 50.36 | 47.0 |
| OQU80062 | Sorghum | plasma membrane | 49.64 | 46.03 |
| CDY06258 | Canola | cytosol | 3.57 | 45.45 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 47.86 | 45.42 |
| Zm00001d029810_P001 | Maize | mitochondrion | 66.43 | 45.37 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 46.79 | 43.52 |
| Zm00001d041458_P001 | Maize | plasma membrane | 45.36 | 43.34 |
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 33.57 | 43.12 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 34.29 | 42.11 |
| CDX94121 | Canola | cytosol | 36.07 | 40.89 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 42.5 | 40.75 |
| CDY09918 | Canola | cytosol, plasma membrane | 37.86 | 40.61 |
| CDY68059 | Canola | cytosol, plasma membrane | 38.21 | 40.23 |
| CDY51371 | Canola | cytosol | 37.14 | 40.0 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 54.29 | 39.9 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 37.86 | 38.41 |
| CDY06257 | Canola | cytosol, plastid | 25.0 | 35.18 |
| CDX97889 | Canola | golgi, plasma membrane | 36.43 | 32.28 |
| CDX86488 | Canola | cytosol | 38.21 | 21.57 |
| CDY10274 | Canola | cytosol | 37.5 | 19.13 |
Protein Annotations
| EnsemblPlants:CDX97357 | EnsemblPlantsGene:GSBRNA2T00104450001 | GO:A0A078E8I5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:Fatty_acid_hydroxylase | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF67 | PFAM:PF04116 |
| ProteinID:CDX97357 | ProteinID:CDX97357.1 | TMHMM:TMhelix | UniParc:UPI0004EE9F83 | MapMan:5.5.2.1 | : |
Description
BnaA02g21480D
Coordinates
chrLK031898:-:1309130..1311259
Molecular Weight (calculated)
32721.4 Da
IEP (calculated)
7.747
GRAVY (calculated)
-0.041
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPYTVWFDY SATKSDYYLY CHNILFLFLV FSLAPIPLVF VELARSVSGW FDRYKIQPKV NYSLSDMFGC YKDVMKMFIL VVGPLQLVSY PSIQMIGIRS
101: GLPLPTLSEM LPQLFVYFLI EDYTNYWVHR FFHSKWGYEN IHRVHHEYTA PIGYAAPYAH WAEVLLLGIP TFMGPAIAPG HMITFWLWIA LRQIEAIETH
201: SGYDFPWSPT KYIPFYGGAE YHDYHHYVGG QSQSNFASVF TYCDYIYGTD KGYRFQKKLL EQIKESSKKS NRHNGGIKSD
101: GLPLPTLSEM LPQLFVYFLI EDYTNYWVHR FFHSKWGYEN IHRVHHEYTA PIGYAAPYAH WAEVLLLGIP TFMGPAIAPG HMITFWLWIA LRQIEAIETH
201: SGYDFPWSPT KYIPFYGGAE YHDYHHYVGG QSQSNFASVF TYCDYIYGTD KGYRFQKKLL EQIKESSKKS NRHNGGIKSD
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.