Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 83.67 | 87.46 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 67.0 | 67.22 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 63.33 | 63.12 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 61.0 | 60.8 |
| TraesCS5A01G414500.1 | Wheat | plasma membrane | 57.67 | 59.66 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 59.33 | 58.75 |
| GSMUA_Achr11P... | Banana | plasma membrane | 59.0 | 58.42 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.33 | 58.24 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 43.67 | 57.46 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 38.33 | 53.99 |
| CDY41294 | Canola | cytosol | 52.0 | 52.35 |
| KRH57309 | Soybean | endoplasmic reticulum | 51.67 | 52.19 |
| KRH04041 | Soybean | endoplasmic reticulum | 37.67 | 51.83 |
| Bra033117.1-P | Field mustard | cytosol | 50.33 | 50.67 |
| CDX97357 | Canola | cytosol | 47.0 | 50.36 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 50.0 | 50.34 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 49.67 | 50.0 |
| AT4G22756.1 | Thale cress | plasma membrane | 49.67 | 49.83 |
| Solyc08g079570.2.1 | Tomato | cytosol | 49.0 | 49.66 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 35.67 | 48.42 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 46.67 | 48.11 |
| PGSC0003DMT400033236 | Potato | cytosol | 46.33 | 46.33 |
| Solyc01g091320.2.1 | Tomato | cytosol | 46.33 | 46.33 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 45.0 | 46.08 |
| CDY41295 | Canola | cytosol | 39.0 | 45.35 |
| KRH57571 | Soybean | plastid | 15.67 | 41.96 |
| CDX82968 | Canola | plasma membrane | 51.33 | 40.96 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 32.0 | 36.09 |
| Bra013643.1-P | Field mustard | cytosol | 50.33 | 34.01 |
| CDX94121 | Canola | cytosol | 24.67 | 29.96 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G013400.1 | EnsemblPlantsGene:TraesCS7A01G013400 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:Fatty_acid_hydroxylase | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF51 | PFAM:PF04116 | SEG:seg |
| TMHMM:TMhelix | MapMan:5.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:6096516..6102123
Molecular Weight (calculated)
33866.4 Da
IEP (calculated)
8.637
GRAVY (calculated)
0.233
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPYATAGEA EAALGRAMTW AEAACFRYSV ATPDYYLYCH HIVIFLVVYT LALLPLAVLQ LRAPAILLPY KLQPVHLKPA AFLRCYVRTV RVFLLAMGPI
101: QLLSYPAVKM VGIRTGLPLP SAGETAAQMA VYLLLEDYLG YWVHRLLHTK WGYEKIHHVH HEFTAPVGYV GLYAHWSDVL IIGFPAFVGP AVVPCHMTTL
201: WLWFVIRQLA LIDAHDGFDF PLNPANFIPF YGGAPHHDYH HRVGRKSQSN FASVFTFCDY IYGTDKHFTD HKASLAKLKE MAQNSTEKRE TMNFIGGKQA
101: QLLSYPAVKM VGIRTGLPLP SAGETAAQMA VYLLLEDYLG YWVHRLLHTK WGYEKIHHVH HEFTAPVGYV GLYAHWSDVL IIGFPAFVGP AVVPCHMTTL
201: WLWFVIRQLA LIDAHDGFDF PLNPANFIPF YGGAPHHDYH HRVGRKSQSN FASVFTFCDY IYGTDKHFTD HKASLAKLKE MAQNSTEKRE TMNFIGGKQA
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.