Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- endoplasmic reticulum 2
- vacuole 2
- extracellular 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 64.53 | 89.67 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 47.3 | 76.92 |
| CDX97357 | Canola | cytosol | 69.26 | 73.21 |
| AT4G22756.1 | Thale cress | plasma membrane | 73.31 | 72.58 |
| Bra033117.1-P | Field mustard | cytosol | 72.97 | 72.48 |
| CDY41294 | Canola | cytosol | 72.97 | 72.48 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 72.3 | 71.81 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 71.62 | 71.14 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 68.58 | 67.0 |
| CDY41295 | Canola | cytosol | 57.77 | 66.28 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 64.86 | 65.98 |
| GSMUA_Achr11P... | Banana | plasma membrane | 67.23 | 65.68 |
| TraesCS1B01G219200.2 | Wheat | plasma membrane | 66.55 | 65.67 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 66.55 | 65.45 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 66.22 | 65.12 |
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 66.22 | 65.12 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 66.22 | 65.12 |
| GSMUA_Achr8P19400_001 | Banana | plastid | 52.36 | 64.85 |
| EER94557 | Sorghum | cytosol | 65.54 | 64.45 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 36.15 | 60.8 |
| GSMUA_Achr5P18800_001 | Banana | cytosol, peroxisome, plasma membrane | 61.15 | 60.33 |
| Solyc01g091320.2.1 | Tomato | cytosol | 60.47 | 59.67 |
| CDX82968 | Canola | plasma membrane | 71.62 | 56.38 |
| TraesCS4B01G332500.1 | Wheat | plasma membrane | 54.39 | 55.52 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 52.7 | 55.12 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 53.72 | 54.83 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 54.05 | 54.79 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 56.42 | 54.75 |
| Os03t0108500-01 | Rice | cytosol | 55.07 | 54.33 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 52.36 | 54.01 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 54.39 | 53.85 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 53.38 | 52.49 |
| TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 52.36 | 52.19 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 53.04 | 52.16 |
| TraesCS1D01G008900.1 | Wheat | plasma membrane | 52.36 | 51.84 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 52.7 | 51.83 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 52.03 | 51.16 |
| TraesCSU01G085800.1 | Wheat | cytosol, plasma membrane, plastid | 51.35 | 50.84 |
| TraesCS5D01G422900.1 | Wheat | plasma membrane | 49.66 | 50.69 |
| TraesCS5A01G414500.1 | Wheat | plasma membrane | 48.99 | 50.0 |
| OQU80062 | Sorghum | plasma membrane | 51.01 | 50.0 |
| TraesCS7A01G013400.1 | Wheat | plasma membrane | 49.66 | 49.0 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 37.5 | 48.68 |
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 35.47 | 48.17 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 47.97 | 48.14 |
| Bra013643.1-P | Field mustard | cytosol | 71.62 | 47.75 |
| Zm00001d041458_P001 | Maize | plasma membrane | 46.96 | 47.44 |
| Zm00001d029810_P001 | Maize | mitochondrion | 65.54 | 47.32 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 46.96 | 46.18 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 43.58 | 44.18 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 53.04 | 41.21 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 36.15 | 39.78 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 34.12 | 38.11 |
Protein Annotations
| MapMan:5.5.2.1 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 | GO:GO:0055114 | UniProt:K4CNV7 |
| PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF67 | EnsemblPlantsGene:Solyc08g079570.2 | EnsemblPlants:Solyc08g079570.2.1 | TMHMM:TMhelix |
| UniParc:UPI000276B2F5 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:63068534..63073239
Molecular Weight (calculated)
34338.6 Da
IEP (calculated)
8.584
GRAVY (calculated)
0.114
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPFKTLQEA ESAIGRSLTT AETIWFNYSA NKSDYYLYCH NILFLFLIFS CVPLYYIFLE IFFRKSIQTY KIQPKVNLSL SDVFRCYKVV MRMFILVVGP
101: LQLVSYPSVK MIGIRTGLPL PSLWVILLQL GTYFIVEDYT NYWIHRFLHC KWGYEKIHKV HHEYTAPIGF AAPYAHWLEI LILGIPSFLG PAIAPGHMIT
201: FWLWIAFRQI EAIETHSGYD LPWSLTKYVP FYGGADYHDY HHYVGGQSQS NFASVFTYCD YIYGTDKGYR YQKKVLQQLK GASNANGGSA TFAKDD
101: LQLVSYPSVK MIGIRTGLPL PSLWVILLQL GTYFIVEDYT NYWIHRFLHC KWGYEKIHKV HHEYTAPIGF AAPYAHWLEI LILGIPSFLG PAIAPGHMIT
201: FWLWIAFRQI EAIETHSGYD LPWSLTKYVP FYGGADYHDY HHYVGGQSQS NFASVFTYCD YIYGTDKGYR YQKKVLQQLK GASNANGGSA TFAKDD
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.