Factsheet for Bra013643.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 3
cytosol 2
vacuole 2
extracellular 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41294	Canola	cytosol	61.26	91.28
AT4G22756.1	Thale cress	plasma membrane	57.66	85.62
Bra033117.1-P	Field mustard	cytosol	55.63	82.89
PGSC0003DMT400010023	Potato	endoplasmic reticulum	35.36	73.71
CDX82968	Canola	plasma membrane	61.71	72.87
Solyc08g079570.2.1	Tomato	cytosol	47.75	71.62
GSMUA_Achr11P...	Banana	plasma membrane	45.5	66.67
GSMUA_Achr5P19760_001	Banana	plasma membrane	45.27	66.34
TraesCS1A01G205700.1	Wheat	plasma membrane	44.59	65.78
HORVU1Hr1G052890.1	Barley	plasma membrane	44.59	65.78
TraesCS1D01G208900.1	Wheat	plasma membrane	44.59	65.78
TraesCS1B01G219200.2	Wheat	plasma membrane	44.14	65.33
Os10t0545200-01	Rice	cytosol, plasma membrane, plastid	44.14	65.12
GSMUA_Achr8P19400_001	Banana	plastid	34.68	64.44
EER94557	Sorghum	cytosol	43.47	64.12
HORVU4Hr1G018180.1	Barley	cytosol, golgi, plastid	25.0	63.07
GSMUA_Achr5P18800_001	Banana	cytosol, peroxisome, plasma membrane	40.32	59.67
KRH40602	Soybean	cytosol, endoplasmic reticulum, plasma membrane	38.74	58.7
TraesCS4B01G332500.1	Wheat	plasma membrane	37.61	57.59
HORVU4Hr1G080880.2	Barley	plasma membrane	37.84	57.53
TraesCS4D01G329200.1	Wheat	plasma membrane	36.94	56.55
HORVU7Hr1G000980.3	Barley	plasma membrane	36.26	56.1
TraesCS5A01G503600.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane	37.16	55.18
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	37.84	55.08
TraesCS1D01G007100.1	Wheat	cytosol, plasma membrane, plastid	36.71	54.88
HORVU1Hr1G001170.1	Barley	cytosol	34.91	54.77
TraesCS4B01G097200.1	Wheat	cytosol, golgi, plasma membrane	36.71	54.15
TraesCS4A01G218400.1	Wheat	cytosol, golgi, plasma membrane	36.49	53.82
Os03t0108500-01	Rice	cytosol	36.04	53.33
TraesCS4D01G093600.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	36.04	53.16
HORVU4Hr1G018150.1	Barley	cytosol, golgi, plasma membrane	36.04	53.16
TraesCS5D01G422900.1	Wheat	plasma membrane	34.68	53.1
TraesCS1D01G008900.1	Wheat	plasma membrane	35.59	52.84
TraesCS5A01G414500.1	Wheat	plasma membrane	34.23	52.41
OQU80062	Sorghum	plasma membrane	35.36	51.99
TraesCSU01G085800.1	Wheat	cytosol, plasma membrane, plastid	34.91	51.84
TraesCS7A01G013400.1	Wheat	plasma membrane	34.01	50.33
Zm00001d040979_P001	Maize	cytosol, plasma membrane, plastid	24.32	49.54
OQU77931	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	25.23	49.12
OQU86919	Sorghum	golgi, peroxisome, plasma membrane	32.21	48.47
Zm00001d041458_P001	Maize	plasma membrane	31.98	48.46
OQU79557	Sorghum	golgi, peroxisome, plasma membrane	31.98	47.18
Zm00001d029810_P001	Maize	mitochondrion	43.24	46.83
OQU79560	Sorghum	endoplasmic reticulum, plasma membrane, plastid	28.83	43.84
HORVU4Hr1G090810.1	Barley	cytosol	37.16	43.31
Bra039978.1-P	Field mustard	endoplasmic reticulum, golgi	22.75	31.46
Bra030681.1-P	Field mustard	cytosol	24.55	21.08

Protein Annotations

MapMan:5.5.2.1	EnsemblPlantsGene:Bra013643	EnsemblPlants:Bra013643.1	EnsemblPlants:Bra013643.1-P	InterPro:Fatty_acid_hydroxylase	GO:GO:0000254
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021
GO:GO:0016126	GO:GO:0016491	GO:GO:0055114	UniProt:M4DAY3	PFAM:PF04116	PANTHER:PTHR11863
PANTHER:PTHR11863:SF67	TMHMM:TMhelix	UniParc:UPI00025458F0	:	:	:

Description

AT4G22756 (E=4e-157) SMO1-2, ATSMO1, ATSMO1-2, SMO1 | SMO1-2 (STEROL C4-METHYL OXIDASE 1-2); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic

Coordinates

chrA01:-:6808135..6815904

Molecular Weight (calculated)

51772.3 Da

IEP (calculated)

6.963

GRAVY (calculated)

0.058

Length

444 amino acids

Sequence
(BLAST)

001: MIPYATIEEA SLALGRNLTT LETLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFVE LARSASGWFD RYKIQPKGKN SFSDMFRCYR DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSFGEIAA QLVVYFLVED YTNYWVHRFF HSKWGYEKIH HIHHEYTAPI GYAAPYAHWA EVLLLGVPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWTLTKF IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ MTGIRSGLPL PSLMEIVAQL
301: VVYFLIEDYT NYWIHRWLHC KWGYEKIHRV HHEYTSPIGY ASPYAHWAEV LLLGIPTFLG PAIAPGHIMT FWLWISLRQM EAIETHSGYD LPWTLTKLVP
401: FYGGAEYHDY HHYVGGKSQS NFASVFTYCD YIYGTDKFIR TINL

Best Arabidopsis Sequence Match ( AT4G22756.1 )
(BLAST)

001: MIPYATIEEA SIALSRNLTW LETLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFIE SSQSTSDLFN RYKIQPKVKN SFSSMFKCYK DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSCMEIVA QLVVYFLVED YTNYWVHRFF HCKWGYEKFH HIHHEYTAPI GYAAPYAHWA EVLLLGIPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWSLTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ MKEKSKKSNK LVNGGEKFD

Arabidopsis Description

SMO1-2Methylsterol monooxygenase 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q1EC69]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.