Factsheet for GSMUA_Achr8P19400_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 2
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71421	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.3	68.68
PGSC0003DMT400010023	Potato	endoplasmic reticulum	58.16	65.26
GSMUA_Achr5P18800_001	Banana	cytosol, peroxisome, plasma membrane	80.33	64.0
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	71.97	56.39
KRH57309	Soybean	endoplasmic reticulum	67.78	54.55
GSMUA_Achr5P19760_001	Banana	plasma membrane	67.78	53.47
GSMUA_Achr11P...	Banana	plasma membrane	67.36	53.14
CDY41294	Canola	cytosol	65.69	52.68
Solyc01g091320.2.1	Tomato	cytosol	66.11	52.67
Solyc08g079570.2.1	Tomato	cytosol	64.85	52.36
PGSC0003DMT400033236	Potato	cytosol	65.69	52.33
AT4G22756.1	Thale cress	plasma membrane	64.85	51.84
Bra033117.1-P	Field mustard	cytosol	64.02	51.34
AT4G22755.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	62.34	51.2
CDX97357	Canola	cytosol	59.0	50.36
CDY04397	Canola	cytosol, plasma membrane, plastid	62.76	50.34
AT4G12110.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	62.34	50.0
VIT_00s2125g00010.t01	Wine grape	cytosol	46.03	49.77
KRH04041	Soybean	endoplasmic reticulum	45.19	49.54
KRH40602	Soybean	cytosol, endoplasmic reticulum, plasma membrane	60.67	49.49
CDY41295	Canola	cytosol	51.88	48.06
CDX82968	Canola	plasma membrane	64.02	40.69
Bra013643.1-P	Field mustard	cytosol	64.44	34.68
GSMUA_Achr9P03480_001	Banana	endoplasmic reticulum, plasma membrane	35.56	31.84
GSMUA_Achr7P10640_001	Banana	extracellular, plasma membrane	34.73	31.32
CDX94121	Canola	cytosol	31.8	30.77
GSMUA_Achr6P04970_001	Banana	extracellular, plasma membrane	33.89	30.68
GSMUA_Achr10P...	Banana	cytosol	36.4	28.52
KRH57571	Soybean	plastid	12.13	25.89

Protein Annotations

EnsemblPlants:GSMUA_Achr8P19400_001	EnsemblPlants:GSMUA_Achr8T19400_001	EnsemblPlantsGene:GSMUA_Achr8G19400_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058
GO:GO:0016491	GO:GO:0055114	InterPro:Fatty_acid_hydroxylase	PANTHER:PTHR11863	PANTHER:PTHR11863:SF67	PFAM:PF04116
UniParc:UPI000294A1FD	UniProt:M0TRU3	MapMan:5.5.2.1	:	:	:

Description

fatty acid hydroxylase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G19400_001]

Coordinates

chr8:-:24644745..24646693

Molecular Weight (calculated)

27515.8 Da

IEP (calculated)

7.519

GRAVY (calculated)

-0.047

Length

239 amino acids

Sequence
(BLAST)

001: MLPFASISEA EAALGRNLTS AETVWFRNVV KTFVFAVGPL QLFSFPTIKW WGIRLGLPLP SAWEVAAQLG VYFVVEDYFN YWLHRALHCR WGYEHVHRVH
101: HEFTAPIGFA APYAHWAEVL ILGLPAFLGP AIAPGHILTF WLWFVLRHIE AIEIHCGYDF PRTPTKYIPF YGGAEFHDYH HYVGGQSHSN FASVFTYCDY
201: IYGTDKGYRY HKAVSVKLRR QSDADKQHGE MTDMSGKRD

Best Arabidopsis Sequence Match ( AT4G22756.1 )
(BLAST)

001: MIPYATIEEA SIALSRNLTW LETLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFIE SSQSTSDLFN RYKIQPKVKN SFSSMFKCYK DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSCMEIVA QLVVYFLVED YTNYWVHRFF HCKWGYEKFH HIHHEYTAPI GYAAPYAHWA EVLLLGIPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWSLTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ MKEKSKKSNK LVNGGEKFD

Arabidopsis Description

SMO1-2Methylsterol monooxygenase 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q1EC69]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.