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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum, vacuole
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71421 Canola endoplasmic reticulum, extracellular, plasma membrane 65.26 76.37
Solyc08g079570.2.1 Tomato cytosol 89.67 64.53
HORVU4Hr1G018180.1 Barley cytosol, golgi, plastid 50.23 60.8
GSMUA_Achr8P19400_001 Banana plastid 65.26 58.16
CDX97357 Canola cytosol 76.06 57.86
AT4G22756.1 Thale cress plasma membrane 76.53 54.52
Bra033117.1-P Field mustard cytosol 76.06 54.36
CDY41294 Canola cytosol 75.59 54.03
AT4G12110.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 74.65 53.36
CDY04397 Canola cytosol, plasma membrane, plastid 74.65 53.36
TraesCS1B01G219200.2 Wheat plasma membrane 72.77 51.67
TraesCS1A01G205700.1 Wheat plasma membrane 72.3 51.16
TraesCS1D01G208900.1 Wheat plasma membrane 72.3 51.16
GSMUA_Achr11P... Banana plasma membrane 72.77 51.16
HORVU1Hr1G052890.1 Barley plasma membrane 71.83 50.83
GSMUA_Achr5P19760_001 Banana plasma membrane 72.3 50.83
AT4G22755.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 69.01 50.52
Os10t0545200-01 Rice cytosol, plasma membrane, plastid 71.36 50.5
EER94557 Sorghum cytosol 70.42 49.83
CDY41295 Canola cytosol 56.81 46.9
GSMUA_Achr5P18800_001 Banana cytosol, peroxisome, plasma membrane 65.26 46.33
PGSC0003DMT400033236 Potato cytosol 61.97 44.0
CDX82968 Canola plasma membrane 75.12 42.55
TraesCS4B01G332500.1 Wheat plasma membrane 57.75 42.41
HORVU4Hr1G080880.2 Barley plasma membrane 57.75 42.12
TraesCS4D01G329200.1 Wheat plasma membrane 57.28 42.07
HORVU1Hr1G001170.1 Barley cytosol 55.87 42.05
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 60.09 41.97
Os03t0108500-01 Rice cytosol 58.69 41.67
TraesCS5A01G503600.2 Wheat cytosol, endoplasmic reticulum, plasma membrane 58.22 41.47
TraesCS4B01G097200.1 Wheat cytosol, golgi, plasma membrane 58.22 41.2
TraesCS4A01G218400.1 Wheat cytosol, golgi, plasma membrane 58.22 41.2
TraesCS4D01G093600.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 57.75 40.86
HORVU4Hr1G018150.1 Barley cytosol, golgi, plasma membrane 57.75 40.86
HORVU7Hr1G000980.3 Barley plasma membrane 54.93 40.77
TraesCS1D01G008900.1 Wheat plasma membrane 55.87 39.8
TraesCS1D01G007100.1 Wheat cytosol, plasma membrane, plastid 55.4 39.73
TraesCSU01G085800.1 Wheat cytosol, plasma membrane, plastid 54.93 39.13
TraesCS5D01G422900.1 Wheat plasma membrane 52.58 38.62
TraesCS7A01G013400.1 Wheat plasma membrane 53.99 38.33
TraesCS5A01G414500.1 Wheat plasma membrane 52.11 38.28
OQU80062 Sorghum plasma membrane 53.99 38.08
Zm00001d041458_P001 Maize plasma membrane 51.17 37.2
Zm00001d029810_P001 Maize mitochondrion 70.42 36.59
OQU86919 Sorghum golgi, peroxisome, plasma membrane 50.23 36.27
Bra013643.1-P Field mustard cytosol 73.71 35.36
OQU79557 Sorghum golgi, peroxisome, plasma membrane 49.77 35.22
OQU79560 Sorghum endoplasmic reticulum, plasma membrane, plastid 47.42 34.59
OQU77931 Sorghum cytosol, endoplasmic reticulum, plasma membrane 34.74 32.46
PGSC0003DMT400078196 Potato endoplasmic reticulum, plasma membrane 40.38 31.97
PGSC0003DMT400005519 Potato extracellular, plasma membrane 39.44 31.58
HORVU4Hr1G090810.1 Barley cytosol 55.87 31.23
Zm00001d040979_P001 Maize cytosol, plasma membrane, plastid 30.99 30.28
Protein Annotations
EnsemblPlants:PGSC0003DMT400010023EnsemblPlantsGene:PGSC0003DMG400003929GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008610GO:GO:0009058GO:GO:0016491
GO:GO:0055114InterPro:Fatty_acid_hydroxylasePANTHER:PTHR11863PANTHER:PTHR11863:SF67PFAM:PF04116PGSC:PGSC0003DMG400003929
SEG:segUniParc:UPI000296135FUniProt:M0ZXC4MapMan:5.5.2.1::
Description
C-4 methyl sterol oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400003929]
Coordinates
chr8:-:53249121..53254150
Molecular Weight (calculated)
24471.4 Da
IEP (calculated)
7.720
GRAVY (calculated)
-0.041
Length
213 amino acids
Sequence
(BLAST)
001: MRMFILVVGP LQLVSYPSVK MIGIRTSLPL PSLWVILLQL GTYFIVEDYT NYWIHRFLHC KWGYEKIHKV HHEYTAPIGF AAPYAHWLEV LILGIPSFLG
101: PAIAPGHMIT FWLWIAFRQI EAIETHSGYD LPWSLTKYIP FYGGADYHDY HHYVGGQSQS NFASVFTYCD YIYGTDKGYR YQKKVLQQLK GASNANGEQN
201: GGSVTFAKDC KDD
Best Arabidopsis Sequence Match ( AT4G22756.1 )
(BLAST)
001: MIPYATIEEA SIALSRNLTW LETLWFDYSA TKSDYYLYCH NILFLFLIFS LVPLPLVFIE SSQSTSDLFN RYKIQPKVKN SFSSMFKCYK DVMKMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPSCMEIVA QLVVYFLVED YTNYWVHRFF HCKWGYEKFH HIHHEYTAPI GYAAPYAHWA EVLLLGIPTF LGPAIAPGHM
201: ITFWLWIALR QIEAIETHSG YDFPWSLTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLQQ MKEKSKKSNK LVNGGEKFD
Arabidopsis Description
SMO1-2Methylsterol monooxygenase 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q1EC69]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.