Factsheet for TraesCSU01G085800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G008900.1	Wheat	plasma membrane	94.65	94.65
HORVU1Hr1G001170.1	Barley	cytosol	83.95	88.69
CDY71421	Canola	endoplasmic reticulum, extracellular, plasma membrane	35.79	58.79
OQU77931	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	43.48	57.02
GSMUA_Achr11P...	Banana	plasma membrane	57.19	56.44
GSMUA_Achr5P19760_001	Banana	plasma membrane	56.86	56.11
KRH04041	Soybean	endoplasmic reticulum	40.13	55.05
PGSC0003DMT400010023	Potato	endoplasmic reticulum	39.13	54.93
KRH57309	Soybean	endoplasmic reticulum	53.85	54.21
VIT_00s2125g00010.t01	Wine grape	cytosol	39.8	53.85
CDX97357	Canola	cytosol	48.83	52.14
Bra033117.1-P	Field mustard	cytosol	51.84	52.01
Solyc08g079570.2.1	Tomato	cytosol	50.84	51.35
CDY41294	Canola	cytosol	51.17	51.34
AT4G12110.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	51.17	51.34
CDY04397	Canola	cytosol, plasma membrane, plastid	50.84	51.01
AT4G22756.1	Thale cress	plasma membrane	50.84	50.84
Solyc01g091320.2.1	Tomato	cytosol	50.84	50.67
CDY41295	Canola	cytosol	42.81	49.61
AT4G22755.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	48.16	49.48
PGSC0003DMT400033236	Potato	cytosol	49.16	49.0
KRH40602	Soybean	cytosol, endoplasmic reticulum, plasma membrane	47.49	48.46
CDX82968	Canola	plasma membrane	50.5	40.16
KRH57571	Soybean	plastid	14.72	39.29
Bra013643.1-P	Field mustard	cytosol	51.84	34.91
CDX94121	Canola	cytosol	23.75	28.74

Protein Annotations

EnsemblPlants:TraesCSU01G085800.1	EnsemblPlantsGene:TraesCSU01G085800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058	GO:GO:0016491
GO:GO:0055114	InterPro:Fatty_acid_hydroxylase	PANTHER:PTHR11863	PANTHER:PTHR11863:SF51	PFAM:PF04116	SEG:seg
TMHMM:TMhelix	MapMan:5.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:76614103..76616039

Molecular Weight (calculated)

33639.8 Da

IEP (calculated)

7.715

GRAVY (calculated)

0.160

Length

299 amino acids

Sequence
(BLAST)

001: MLPYSTVAEA EAALARSMSY AEGAWFRYTA GMPDYYLYCH IVPMLLLVYT LSSVPLALFE LGAPSMALRY KLQPRVQLSP AAFLRCYMDT MCLLLVTIAP
101: LHLVSYPAVK TAGIRTGPPL PSVGETVAQL VVYLLVDDYL GYWIHRLLHT KWGYDNIHRV HHEYTAPIAF AAPYGHWSDV LILGAPSLVG PSIVPCHITT
201: LWLWLVIRQI EAIDTHSGFK FPFNPTNYIP FYGGAEYHDY HHFVGEHSQS NFSSLFTFCD YLHGTDKGYR YHMANLVKST MKMKGASTAT MATPRSEAK

Best Arabidopsis Sequence Match ( AT1G07420.1 )
(BLAST)

001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT

Arabidopsis Description

SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.